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Difference between revisions of "TSS:Hg 102484.1"

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(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=47 |entrez_id=3309 |gc_percent=0.616915 |gene_alias=BIP|GRP78|HEL-S-89n|MIF2 |gene_description=heat shock protein family A (Hsp7...")
 
 
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{{TSSDetail
 
{{TSSDetail
 +
|GRP78=
 +
|HEL-S-89n=
 +
|MIF2=
 +
|all_trans=HGNC:5238
 +
|chr=chr9
 
|cpg_percent=0.09
 
|cpg_percent=0.09
|distance_to_tss=47
+
|distance=0
 +
|distance_to_tss=3
 +
|end=125241352
 +
|end_of_center_position=125241340
 
|entrez_id=3309
 
|entrez_id=3309
 
|gc_percent=0.616915
 
|gc_percent=0.616915
|gene_alias=BIP|GRP78|HEL-S-89n|MIF2
+
|gene_alias=BIP{{!}}GRP78{{!}}HEL-S-89n{{!}}MIF2
 
|gene_description=heat shock protein family A (Hsp70) member 5
 
|gene_description=heat shock protein family A (Hsp70) member 5
|gene_name=HSPA5
+
|gene_id=3309
 +
|gene_name=heat shock protein family A (Hsp70) member 5
 +
|gene_source=HGNC:5238
 +
|gene_symbol=HSPA5
 +
|gene_synonyms=BiP
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:5238
 
|nearest_ensembl=ENSG00000044574
 
|nearest_ensembl=ENSG00000044574
 
|nearest_promoter_id=NM_005347
 
|nearest_promoter_id=NM_005347
 
|nearest_refseq=NM_005347
 
|nearest_refseq=NM_005347
 
|nearest_unigene=Hs.743241
 
|nearest_unigene=Hs.743241
|tata_box="-36(GGGTATATAAGC,-,0.00)"
+
|num_trans=3309
 +
|species=human
 +
|start=125241327
 +
|start_of_center_position=125241339
 +
|strand=-
 +
|tata_box=-36(GGGTATATAAGC,-,0.00)
 +
|transcript_name=ENST00000324460.7 ENST00000680640.1 ENST00000679475.1 ENST00000680494.1 ENST00000681774.1 BC020235 X87949 AK293604
 +
|tss_classification=yes
 
|tss_id=hg_102484.1
 
|tss_id=hg_102484.1
 +
|tss_score=1
 +
|uniprot_id=B4DEF7 V9HWB4
 
}}
 
}}

Latest revision as of 18:28, 19 July 2021

Basic information about the TSS


TSS ID:hg_102484.1
Species:human
Chr:chr9
TSS Classification:yes
Start:125241327
End:125241352
Strand:-
TSS Score:1
Start of the center position in the TSS region:125241339
End of the center position in the TSS region:125241340



Gene and protein annotation


Transcript_name:ENST00000324460.7 ENST00000680640.1 ENST00000679475.1 ENST00000680494.1 ENST00000681774.1 BC020235 X87949 AK293604
Distance:0
GeneID:3309
HGNC/MGI_ID:HGNC:5238
UniProt_ID:B4DEF7 V9HWB4
Gene_name:heat shock protein family A (Hsp70) member 5
Gene_symbol:HSPA5
Gene_synonyms:BiP
Gene_source:HGNC:5238



Transcript annotation


Transcript_name:ENST00000324460.7 ENST00000680640.1 ENST00000679475.1 ENST00000680494.1 ENST00000681774.1 BC020235 X87949 AK293604
Distance:0
Num_trans:3309
All_trans:HGNC:5238



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_005347
Entrez ID:3309
Nearest Unigene:Hs.743241
Nearest Refseq:NM_005347
Nearest Ensembl:ENSG00000044574
Gene Name:heat shock protein family A (Hsp70) member 5
Gene Alias:BIP|GRP78|HEL-S-89n|MIF2
Gene Description:heat shock protein family A (Hsp70) member 5
Gene Type:protein-coding
CpG%:0.09
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-36(GGGTATATAAGC,-,0.00)