Difference between revisions of "TSS:Hg 102487.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|GAPex-5= | |GAPex-5= | ||
|RAP6= | |RAP6= | ||
| − | |all_trans= | + | |all_trans=HGNC:18752 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=27 | |distance=27 | ||
| − | |distance_to_tss= | + | |distance_to_tss=222674 |
|end=125484541 | |end=125484541 | ||
| − | |entrez_id= | + | |end_of_center_position=125484535 |
| + | |entrez_id=79109 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias= | + | |gene_alias=JC310{{!}}MIP1{{!}}SIN1{{!}}SIN1b{{!}}SIN1g |
| − | |gene_description= | + | |gene_description=MAPK associated protein 1 |
|gene_id=79109 | |gene_id=79109 | ||
| − | |gene_name= | + | |gene_name=MAPK associated protein 1 |
|gene_source=HGNC:18752 | |gene_source=HGNC:18752 | ||
|gene_symbol=MAPKAP1 | |gene_symbol=MAPKAP1 | ||
| Line 19: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18752 | |hgnc_mgi_id=HGNC:18752 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000119487 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001006617 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_024117 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.495138 |
| − | |num_trans= | + | |num_trans=79109 |
|species=human | |species=human | ||
|start=125484527 | |start=125484527 | ||
| + | |start_of_center_position=125484534 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000444226 | + | |transcript_name=ENST00000444226.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102487.1 | |tss_id=hg_102487.1 | ||
Latest revision as of 18:28, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125484534 |
|---|---|
| End of the center position in the TSS region: | 125484535 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000444226.1 |
|---|---|
| Distance: | 27 |
| Num_trans: | 79109 |
| All_trans: | HGNC:18752 |
TATA-Box annotation
| Distance to TSS: | 222674 |
|---|---|
| Nearest PromoterID: | NM_001006617 |
| Entrez ID: | 79109 |
| Nearest Unigene: | Hs.495138 |
| Nearest Refseq: | NM_024117 |
| Nearest Ensembl: | ENSG00000119487 |
| Gene Name: | MAPK associated protein 1 |
| Gene Alias: | JC310|MIP1|SIN1|SIN1b|SIN1g |
| Gene Description: | MAPK associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
