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Difference between revisions of "TSS:Hg 102508.1"

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Line 4: Line 4:
 
|SIN1b=
 
|SIN1b=
 
|SIN1g=
 
|SIN1g=
|all_trans=ENST00000427078.5:-13 AK290060:-27 AL833042:-31 ENST00000373496.3:-34 AY633624:-37 AY633625:-37 AY633626:-37 ENST00000433483.1:-38 ENST00000350766.7:-39 BC002326:-39 BC003044:-39 ENST00000265960.8:-44 NM_001006617:-44 NM_001006618:-44 ENST00000373503.7:-48 ENST00000373511.6:-67 ENST00000394060.7:-67 AY524429:-67 AY524431:-67 AY524432:-67 AY524430:-67 ENST00000394063.5:-70 NM_001006621:-70 NM_001006619:-70 NM_001006620:-70 NM_024117:-70 M37191:156
+
|all_trans=HGNC:18752
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 26: Line 26:
 
|nearest_refseq=NM_024117
 
|nearest_refseq=NM_024117
 
|nearest_unigene=Hs.495138
 
|nearest_unigene=Hs.495138
|num_trans=27
+
|num_trans=79109
 
|species=human
 
|species=human
 
|start=125707159
 
|start=125707159

Latest revision as of 18:28, 19 July 2021

Basic information about the TSS


TSS ID:hg_102508.1
Species:human
Chr:chr9
TSS Classification:yes
Start:125707159
End:125707164
Strand:-
TSS Score:1
Start of the center position in the TSS region:125707161
End of the center position in the TSS region:125707162



Gene and protein annotation


Transcript_name:ENST00000427078.5
Distance:-13
GeneID:79109
HGNC/MGI_ID:HGNC:18752
UniProt_ID:B1AMA6
Gene_name:MAPK associated protein 1
Gene_symbol:MAPKAP1
Gene_synonyms:MGC2745 MIP1 SIN1
Gene_source:HGNC:18752



Transcript annotation


Transcript_name:ENST00000427078.5
Distance:-13
Num_trans:79109
All_trans:HGNC:18752



TATA-Box annotation


Distance to TSS:46
Nearest PromoterID:NM_001006617
Entrez ID:79109
Nearest Unigene:Hs.495138
Nearest Refseq:NM_024117
Nearest Ensembl:ENSG00000119487
Gene Name:MAPK associated protein 1
Gene Alias:JC310|MIP1|SIN1|SIN1b|SIN1g
Gene Description:MAPK associated protein 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):