Difference between revisions of "TSS:Hg 102536.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HARP= | |HARP= | ||
| − | |all_trans= | + | |all_trans=HGNC:490 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance=- | + | |distance=-46 |
| − | |distance_to_tss= | + | |distance_to_tss=-100 |
|end=127122738 | |end=127122738 | ||
|end_of_center_position=127122735 | |end_of_center_position=127122735 | ||
|entrez_id=23452 | |entrez_id=23452 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=ARP2 | + | |gene_alias=ARP2{{!}}HARP |
|gene_description=angiopoietin like 2 | |gene_description=angiopoietin like 2 | ||
|gene_id=23452 | |gene_id=23452 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_012098 | |nearest_refseq=NM_012098 | ||
|nearest_unigene=Hs.653262 | |nearest_unigene=Hs.653262 | ||
| − | |num_trans= | + | |num_trans=23452 |
|species=human | |species=human | ||
|start=127122731 | |start=127122731 | ||
|start_of_center_position=127122734 | |start_of_center_position=127122734 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AY358274 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102536.1 | |tss_id=hg_102536.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:29, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127122734 |
|---|---|
| End of the center position in the TSS region: | 127122735 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY358274 |
|---|---|
| Distance: | -46 |
| Num_trans: | 23452 |
| All_trans: | HGNC:490 |
TATA-Box annotation
| Distance to TSS: | -100 |
|---|---|
| Nearest PromoterID: | NM_012098 |
| Entrez ID: | 23452 |
| Nearest Unigene: | Hs.653262 |
| Nearest Refseq: | NM_012098 |
| Nearest Ensembl: | ENSG00000136859 |
| Gene Name: | angiopoietin like 2 |
| Gene Alias: | ARP2|HARP |
| Gene Description: | angiopoietin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
