Difference between revisions of "TSS:Hg 102540.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-2 |entrez_id=6136 |gc_percent=0.616915 |gene_alias=L12 |gene_description=ribosomal protein L12 |gene_name=RPL12 |gene_type=pro...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:10302 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance_to_tss=- | + | |distance=24 |
| + | |distance_to_tss=-28 | ||
| + | |end=127451438 | ||
| + | |end_of_center_position=127451434 | ||
|entrez_id=6136 | |entrez_id=6136 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=L12 | |gene_alias=L12 | ||
|gene_description=ribosomal protein L12 | |gene_description=ribosomal protein L12 | ||
| − | |gene_name=RPL12 | + | |gene_id=6136 |
| + | |gene_name=ribosomal protein L12 | ||
| + | |gene_source=HGNC:10302 | ||
| + | |gene_symbol=RPL12 | ||
| + | |gene_synonyms=L12 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10302 | ||
|nearest_ensembl=ENSG00000197958 | |nearest_ensembl=ENSG00000197958 | ||
|nearest_promoter_id=NM_000976 | |nearest_promoter_id=NM_000976 | ||
|nearest_refseq=NM_000976 | |nearest_refseq=NM_000976 | ||
|nearest_unigene=Hs.408054 | |nearest_unigene=Hs.408054 | ||
| + | |num_trans=6136 | ||
| + | |species=human | ||
| + | |start=127451429 | ||
| + | |start_of_center_position=127451433 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000361436.10 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102540.1 | |tss_id=hg_102540.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P30050 | ||
}} | }} | ||
Latest revision as of 18:29, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127451433 |
|---|---|
| End of the center position in the TSS region: | 127451434 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000361436.10 |
|---|---|
| Distance: | 24 |
| Num_trans: | 6136 |
| All_trans: | HGNC:10302 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_000976 |
| Entrez ID: | 6136 |
| Nearest Unigene: | Hs.408054 |
| Nearest Refseq: | NM_000976 |
| Nearest Ensembl: | ENSG00000197958 |
| Gene Name: | ribosomal protein L12 |
| Gene Alias: | L12 |
| Gene Description: | ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
