Personal tools

Difference between revisions of "TSS:Hg 102561.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000463256.5:0 ENST00000493439.1:0 BC080527:0 AK027677:0 BC100907:0 BC100908:0 BC100909:0 BC100910:0 BC156122:1 BC156918:1 BC160144:1 ENST00000336067.10:-8 AK075520:-8 ENST00000373284.10:-10 ENST00000373281.8:-10 ENST00000463577.2:-10 NM_001252023:-10 NM_130459:-10 NM_001085347:-10 NM_001252021:-10 NM_001134430:-10 NM_001134431:-10 NM_001252018:-10 AK055034:-10 ENST00000472723.1:-23 AK092388:-23 ENST00000496460.5:-29 AY358180:-29 BC062340:-30 LF205650:-52 MA441227:-52
+
|all_trans=HGNC:11996
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 22: Line 22:
 
|nearest_refseq=NM_130459
 
|nearest_refseq=NM_130459
 
|nearest_unigene=Hs.444106
 
|nearest_unigene=Hs.444106
|num_trans=31
+
|num_trans=27433
 
|species=human
 
|species=human
 
|start=127735270
 
|start=127735270

Latest revision as of 18:29, 19 July 2021

Basic information about the TSS


TSS ID:hg_102561.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127735270
End:127735284
Strand:-
TSS Score:1
Start of the center position in the TSS region:127735277
End of the center position in the TSS region:127735278



Gene and protein annotation


Transcript_name:ENST00000463256.5 ENST00000493439.1 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910
Distance:0
GeneID:27433
HGNC/MGI_ID:HGNC:11996
UniProt_ID:Q5JU69
Gene_name:torsin family 2 member A
Gene_symbol:TOR2A
Gene_synonyms:FLJ14771 TORP1
Gene_source:HGNC:11996



Transcript annotation


Transcript_name:ENST00000463256.5 ENST00000493439.1 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910
Distance:0
Num_trans:27433
All_trans:HGNC:11996



TATA-Box annotation


Distance to TSS:17
Nearest PromoterID:NM_001252023
Entrez ID:27433
Nearest Unigene:Hs.444106
Nearest Refseq:NM_130459
Nearest Ensembl:ENSG00000160404
Gene Name:torsin family 2 member A
Gene Alias:TORP1
Gene Description:torsin family 2 member A
Gene Type:protein-coding
CpG%:0.125
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):