Difference between revisions of "TSS:Hg 102562.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:11996 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-14 | ||
| + | |end=127735330 | ||
| + | |end_of_center_position=127735309 | ||
|entrez_id=27433 | |entrez_id=27433 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=TORP1 | |gene_alias=TORP1 | ||
|gene_description=torsin family 2 member A | |gene_description=torsin family 2 member A | ||
| − | |gene_name=TOR2A | + | |gene_id=27433 |
| + | |gene_name=torsin family 2 member A | ||
| + | |gene_source=HGNC:11996 | ||
| + | |gene_symbol=TOR2A | ||
| + | |gene_synonyms=FLJ14771 TORP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11996 | ||
|nearest_ensembl=ENSG00000160404 | |nearest_ensembl=ENSG00000160404 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001134430 |
|nearest_refseq=NM_130459 | |nearest_refseq=NM_130459 | ||
|nearest_unigene=Hs.444106 | |nearest_unigene=Hs.444106 | ||
| + | |num_trans=27433 | ||
| + | |species=human | ||
| + | |start=127735286 | ||
| + | |start_of_center_position=127735308 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000336067.10 ENST00000373284.10 ENST00000373281.8 ENST00000463577.2 ENST00000472723.1 ENST00000496460.5 AY358180 BC062340 AK075520 AK055034 AK092388 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102562.1 | |tss_id=hg_102562.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5JU69 Q8N2E6 | ||
}} | }} | ||
Latest revision as of 18:29, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127735308 |
|---|---|
| End of the center position in the TSS region: | 127735309 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000336067.10 ENST00000373284.10 ENST00000373281.8 ENST00000463577.2 ENST00000472723.1 ENST00000496460.5 AY358180 BC062340 AK075520 AK055034 AK092388 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27433 |
| All_trans: | HGNC:11996 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_001134430 |
| Entrez ID: | 27433 |
| Nearest Unigene: | Hs.444106 |
| Nearest Refseq: | NM_130459 |
| Nearest Ensembl: | ENSG00000160404 |
| Gene Name: | torsin family 2 member A |
| Gene Alias: | TORP1 |
| Gene Description: | torsin family 2 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
