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Difference between revisions of "TSS:Hg 102567.1"

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Line 3: Line 3:
 
|PRO34088=
 
|PRO34088=
 
|SHEP1=
 
|SHEP1=
|all_trans=ENST00000464239.5:15 AY358089:-63 ENST00000488685.1:-64 ENST00000440630.5:-193 ENST00000429553.5:-195 NM_001142532:-195 AK311510:-195 NM_001142531:-217 AK294386:-217
+
|all_trans=HGNC:16884
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 25: Line 25:
 
|nearest_refseq=NM_005489
 
|nearest_refseq=NM_005489
 
|nearest_unigene=Hs.306412
 
|nearest_unigene=Hs.306412
|num_trans=9
+
|num_trans=10044
 
|species=human
 
|species=human
 
|start=127762202
 
|start=127762202

Latest revision as of 18:30, 19 July 2021

Basic information about the TSS


TSS ID:hg_102567.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127762202
End:127762223
Strand:-
TSS Score:1
Start of the center position in the TSS region:127762212
End of the center position in the TSS region:127762213



Gene and protein annotation


Transcript_name:ENST00000464239.5
Distance:15
GeneID:10044
HGNC/MGI_ID:HGNC:16884
UniProt_ID:
Gene_name:SH2 domain containing 3C
Gene_symbol:SH2D3C
Gene_synonyms:NSP3
Gene_source:HGNC:16884



Transcript annotation


Transcript_name:ENST00000464239.5
Distance:15
Num_trans:10044
All_trans:HGNC:16884



TATA-Box annotation


Distance to TSS:205
Nearest PromoterID:NM_001142532
Entrez ID:10044
Nearest Unigene:Hs.306412
Nearest Refseq:NM_005489
Nearest Ensembl:ENSG00000095370
Gene Name:SH2 domain containing 3C
Gene Alias:CHAT|NSP3|PRO34088|SHEP1
Gene Description:SH2 domain containing 3C
Gene Type:protein-coding
CpG%:0.025
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):