Difference between revisions of "TSS:Hg 10258.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17497 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=30 |
|end=9943407 | |end=9943407 | ||
| + | |end_of_center_position=9943361 | ||
|entrez_id=84328 | |entrez_id=84328 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:17497 | |hgnc_mgi_id=HGNC:17497 | ||
|nearest_ensembl=ENSG00000162441 | |nearest_ensembl=ENSG00000162441 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032368 |
|nearest_refseq=NM_032368 | |nearest_refseq=NM_032368 | ||
|nearest_unigene=Hs.327252 | |nearest_unigene=Hs.327252 | ||
| − | |num_trans= | + | |num_trans=84328 |
|species=human | |species=human | ||
|start=9943314 | |start=9943314 | ||
| + | |start_of_center_position=9943360 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377223. | + | |transcript_name=ENST00000377223.6 ENST00000377213.1 AK304348 BC007240 AK312550 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10258.1 | |tss_id=hg_10258.1 | ||
Latest revision as of 18:30, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9943360 |
|---|---|
| End of the center position in the TSS region: | 9943361 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377223.6 ENST00000377213.1 AK304348 BC007240 AK312550 |
|---|---|
| Distance: | 0 |
| Num_trans: | 84328 |
| All_trans: | HGNC:17497 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_032368 |
| Entrez ID: | 84328 |
| Nearest Unigene: | Hs.327252 |
| Nearest Refseq: | NM_032368 |
| Nearest Ensembl: | ENSG00000162441 |
| Gene Name: | leucine zipper and CTNNBIP1 domain containing |
| Gene Alias: | - |
| Gene Description: | leucine zipper and CTNNBIP1 domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
