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Difference between revisions of "TSS:Hg 1026.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=EU832427:92 EU832342:92 AB590592:94 AK294121:144 BC007618:-174 ENST00000251296.3:-254 NM_032880:-254 uc001bau.3:-254 AK075316:-254
+
|all_trans=HGNC:28246
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.16
 
|cpg_percent=0.16
 
|distance=92
 
|distance=92
|distance_to_tss=270
+
|distance_to_tss=218
 
|end=18108033
 
|end=18108033
 +
|end_of_center_position=18108017
 
|entrez_id=84966
 
|entrez_id=84966
 
|gc_percent=0.830846
 
|gc_percent=0.830846
Line 21: Line 22:
 
|nearest_refseq=NM_032880
 
|nearest_refseq=NM_032880
 
|nearest_unigene=Hs.212511
 
|nearest_unigene=Hs.212511
|num_trans=9
+
|num_trans=84966
 
|species=human
 
|species=human
 
|start=18107999
 
|start=18107999
 +
|start_of_center_position=18108016
 
|strand=+
 
|strand=+
 
|transcript_name=EU832427 EU832342
 
|transcript_name=EU832427 EU832342

Latest revision as of 18:30, 19 July 2021

Basic information about the TSS


TSS ID:hg_1026.1
Species:human
Chr:chr1
TSS Classification:yes
Start:18107999
End:18108033
Strand:+
TSS Score:1
Start of the center position in the TSS region:18108016
End of the center position in the TSS region:18108017



Gene and protein annotation


Transcript_name:EU832427 EU832342
Distance:92
GeneID:84966
HGNC/MGI_ID:HGNC:28246
UniProt_ID:
Gene_name:immunoglobin superfamily member 21
Gene_symbol:IGSF21
Gene_synonyms:MGC15730 RP11-121A23.1
Gene_source:HGNC:28246



Transcript annotation


Transcript_name:EU832427 EU832342
Distance:92
Num_trans:84966
All_trans:HGNC:28246



TATA-Box annotation


Distance to TSS:218
Nearest PromoterID:NM_032880
Entrez ID:84966
Nearest Unigene:Hs.212511
Nearest Refseq:NM_032880
Nearest Ensembl:ENSG00000117154
Gene Name:immunoglobin superfamily member 21
Gene Alias:-
Gene Description:immunoglobin superfamily member 21
Gene Type:protein-coding
CpG%:0.16
GC%:0.830846
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):