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Difference between revisions of "TSS:Hg 10260.1"

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Line 2: Line 2:
 
|DFF1=
 
|DFF1=
 
|ICAD=
 
|ICAD=
|all_trans=BC000037:-6 AF103799:-7 BT006980:8 KJ896700:8 AB590590:8 CU675773:8 ENST00000476658.5:-9 ENST00000377036.2:-18 BC007721:-18 AF087573:-18 AK313317:-20 AK222546:-22 U91985:-44 BC007112:-56 ENST00000377038.8:-59 NM_004401:-59 NM_213566:-59
+
|all_trans=HGNC:2772
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_004401
 
|nearest_refseq=NM_004401
 
|nearest_unigene=Hs.484782
 
|nearest_unigene=Hs.484782
|num_trans=17
+
|num_trans=1676
 
|species=human
 
|species=human
 
|start=10472465
 
|start=10472465

Latest revision as of 18:30, 19 July 2021

Basic information about the TSS


TSS ID:hg_10260.1
Species:human
Chr:chr1
TSS Classification:yes
Start:10472465
End:10472470
Strand:-
TSS Score:1
Start of the center position in the TSS region:10472467
End of the center position in the TSS region:10472468



Gene and protein annotation


Transcript_name:BC000037
Distance:-6
GeneID:1676
HGNC/MGI_ID:HGNC:2772
UniProt_ID:
Gene_name:DNA fragmentation factor subunit alpha
Gene_symbol:DFFA
Gene_synonyms:DFF-45 DFF1 DFF45 ICAD
Gene_source:HGNC:2772



Transcript annotation


Transcript_name:BC000037
Distance:-6
Num_trans:1676
All_trans:HGNC:2772



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_004401
Entrez ID:1676
Nearest Unigene:Hs.484782
Nearest Refseq:NM_004401
Nearest Ensembl:ENSG00000160049
Gene Name:DNA fragmentation factor subunit alpha
Gene Alias:DFF-45|DFF1|ICAD
Gene Description:DNA fragmentation factor subunit alpha
Gene Type:protein-coding
CpG%:0.105
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):