Difference between revisions of "TSS:Hg 102604.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|HHT1= | |HHT1= | ||
|ORW1= | |ORW1= | ||
| − | |all_trans= | + | |all_trans=NM_000118:-12 AK222669:65 AK302455:65 ENST00000373203.9:93 NM_001114753:93 AK300156:93 AK290389:95 ENST00000344849.4:115 X72012:115 BC020391:231 BC014271:244 DQ893673:395 DQ895827:395 AB590238:395 BT006872:396 J05481:437 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-12 |
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=127854761 | |end=127854761 | ||
| + | |end_of_center_position=127854756 | ||
|entrez_id=2022 | |entrez_id=2022 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=END | + | |gene_alias=END{{!}}HHT1{{!}}ORW1 |
|gene_description=endoglin | |gene_description=endoglin | ||
|gene_id=2022 | |gene_id=2022 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_000118 | |nearest_refseq=NM_000118 | ||
|nearest_unigene=Hs.76753 | |nearest_unigene=Hs.76753 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=127854750 | |start=127854750 | ||
| + | |start_of_center_position=127854755 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_000118.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102604.1 | |tss_id=hg_102604.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5T9B9 |
}} | }} | ||
Latest revision as of 18:30, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 127854755 |
|---|---|
| End of the center position in the TSS region: | 127854756 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000118.3 |
|---|---|
| Distance: | -12 |
| Num_trans: | 16 |
| All_trans: | NM_000118:-12 AK222669:65 AK302455:65 ENST00000373203.9:93 NM_001114753:93 AK300156:93 AK290389:95 ENST00000344849.4:115 X72012:115 BC020391:231 BC014271:244 DQ893673:395 DQ895827:395 AB590238:395 BT006872:396 J05481:437 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_000118 |
| Entrez ID: | 2022 |
| Nearest Unigene: | Hs.76753 |
| Nearest Refseq: | NM_000118 |
| Nearest Ensembl: | ENSG00000106991 |
| Gene Name: | endoglin |
| Gene Alias: | END|HHT1|ORW1 |
| Gene Description: | endoglin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
