Difference between revisions of "TSS:Hg 102605.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000223836.10:-54 | + | |all_trans=NM_001318122:0 ENST00000223836.10:-54 AB021871:400 BT019580:400 CR541977:400 DQ892576:400 GQ891290:400 KJ896402:400 KJ905138:400 DQ895792:400 AB590127:400 CR542004:400 ENST00000413016.5:409 LF346828:419 MA582405:419 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=127873490 | |end=127873490 | ||
|end_of_center_position=127873477 | |end_of_center_position=127873477 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000476 | |nearest_refseq=NM_000476 | ||
|nearest_unigene=Hs.175473 | |nearest_unigene=Hs.175473 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=127873462 | |start=127873462 | ||
|start_of_center_position=127873476 | |start_of_center_position=127873476 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001318122.2 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_102605.1 | |tss_id=hg_102605.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T9B7 | |uniprot_id=Q5T9B7 | ||
}} | }} | ||
Latest revision as of 18:30, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127873476 |
|---|---|
| End of the center position in the TSS region: | 127873477 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001318122.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | NM_001318122:0 ENST00000223836.10:-54 AB021871:400 BT019580:400 CR541977:400 DQ892576:400 GQ891290:400 KJ896402:400 KJ905138:400 DQ895792:400 AB590127:400 CR542004:400 ENST00000413016.5:409 LF346828:419 MA582405:419 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001318122 |
| Entrez ID: | 203 |
| Nearest Unigene: | Hs.175473 |
| Nearest Refseq: | NM_000476 |
| Nearest Ensembl: | ENSG00000106992 |
| Gene Name: | adenylate kinase 1 |
| Gene Alias: | HTL-S-58j |
| Gene Description: | adenylate kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
