Difference between revisions of "TSS:Hg 102609.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=39 |entrez_id=203 |gc_percent=0.751244 |gene_alias=HTL-S-58j |gene_description=adenylate kinase 1 |gene_name=AK1 |gene_type=prot...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:361 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=2 | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
| + | |end=127877717 | ||
| + | |end_of_center_position=127877705 | ||
|entrez_id=203 | |entrez_id=203 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=HTL-S-58j | |gene_alias=HTL-S-58j | ||
|gene_description=adenylate kinase 1 | |gene_description=adenylate kinase 1 | ||
| − | |gene_name=AK1 | + | |gene_id=203 |
| + | |gene_name=adenylate kinase 1 | ||
| + | |gene_source=HGNC:361 | ||
| + | |gene_symbol=AK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:361 | ||
|nearest_ensembl=ENSG00000106992 | |nearest_ensembl=ENSG00000106992 | ||
|nearest_promoter_id=NM_000476 | |nearest_promoter_id=NM_000476 | ||
|nearest_refseq=NM_000476 | |nearest_refseq=NM_000476 | ||
|nearest_unigene=Hs.175473 | |nearest_unigene=Hs.175473 | ||
| − | |tata_box= | + | |num_trans=203 |
| + | |species=human | ||
| + | |start=127877691 | ||
| + | |start_of_center_position=127877704 | ||
| + | |strand=- | ||
| + | |tata_box=-3(CCTTATAAATAG,+,0.00) | ||
| + | |transcript_name=BC100022 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102609.1 | |tss_id=hg_102609.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:30, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127877704 |
|---|---|
| End of the center position in the TSS region: | 127877705 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC100022 |
|---|---|
| Distance: | 2 |
| Num_trans: | 203 |
| All_trans: | HGNC:361 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_000476 |
| Entrez ID: | 203 |
| Nearest Unigene: | Hs.175473 |
| Nearest Refseq: | NM_000476 |
| Nearest Ensembl: | ENSG00000106992 |
| Gene Name: | adenylate kinase 1 |
| Gene Alias: | HTL-S-58j |
| Gene Description: | adenylate kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -3(CCTTATAAATAG,+,0.00) |
