Difference between revisions of "TSS:Hg 10262.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|DFF1= | |DFF1= | ||
|ICAD= | |ICAD= | ||
| − | |all_trans= | + | |all_trans=HGNC:2772 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=10 |
| − | |distance_to_tss= | + | |distance_to_tss=-23 |
|end=10472566 | |end=10472566 | ||
| + | |end_of_center_position=10472553 | ||
|entrez_id=1676 | |entrez_id=1676 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=DFF-45 | + | |gene_alias=DFF-45{{!}}DFF1{{!}}ICAD |
|gene_description=DNA fragmentation factor subunit alpha | |gene_description=DNA fragmentation factor subunit alpha | ||
|gene_id=1676 | |gene_id=1676 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_004401 | |nearest_refseq=NM_004401 | ||
|nearest_unigene=Hs.484782 | |nearest_unigene=Hs.484782 | ||
| − | |num_trans= | + | |num_trans=1676 |
|species=human | |species=human | ||
|start=10472538 | |start=10472538 | ||
| + | |start_of_center_position=10472552 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000377038.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10262.1 | |tss_id=hg_10262.1 | ||
Latest revision as of 18:31, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 10472552 |
|---|---|
| End of the center position in the TSS region: | 10472553 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377038.8 |
|---|---|
| Distance: | 10 |
| Num_trans: | 1676 |
| All_trans: | HGNC:2772 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_213566 |
| Entrez ID: | 1676 |
| Nearest Unigene: | Hs.484782 |
| Nearest Refseq: | NM_004401 |
| Nearest Ensembl: | ENSG00000160049 |
| Gene Name: | DNA fragmentation factor subunit alpha |
| Gene Alias: | DFF-45|DFF1|ICAD |
| Gene Description: | DNA fragmentation factor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
