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Difference between revisions of "TSS:Hg 102628.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC048256:-16 AB451329:-17 AB451473:-17 CR542134:-17 KJ901915:-17 ENST00000473360.1:-272 uc064vzt.1:-272 ENST00000470181.1:-311 uc064vzs.1:-311 ENST00000495270.1:-319 uc064vzr.1:-319 BC015374:-319 ENST00000373110.4:-336 uc064vzu.1:-336 AF061729:-342 BC107863:-347 AB013361:-349 AK312121:-352
+
|all_trans=HGNC:3006
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 6: Line 6:
 
|distance_to_tss=985
 
|distance_to_tss=985
 
|end=127937507
 
|end=127937507
 +
|end_of_center_position=127937500
 
|entrez_id=8818
 
|entrez_id=8818
 
|gc_percent=0.606965
 
|gc_percent=0.606965
 
|gene_alias=CDG1U
 
|gene_alias=CDG1U
|gene_description="dolichyl-phosphate mannosyltransferase subunit 2, regulatory"
+
|gene_description=dolichyl-phosphate mannosyltransferase subunit 2, regulatory
 
|gene_id=8818
 
|gene_id=8818
|gene_name="dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit"
+
|gene_name=dolichyl-phosphate mannosyltransferase subunit 2, regulatory
 
|gene_source=HGNC:3006
 
|gene_source=HGNC:3006
 
|gene_symbol=DPM2
 
|gene_symbol=DPM2
Line 21: Line 22:
 
|nearest_refseq=NM_003863
 
|nearest_refseq=NM_003863
 
|nearest_unigene=Hs.108973
 
|nearest_unigene=Hs.108973
|num_trans=18
+
|num_trans=8818
 
|species=human
 
|species=human
 
|start=127937491
 
|start=127937491
 +
|start_of_center_position=127937499
 
|strand=-
 
|strand=-
 
|transcript_name=BC048256
 
|transcript_name=BC048256

Latest revision as of 18:31, 19 July 2021

Basic information about the TSS


TSS ID:hg_102628.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127937491
End:127937507
Strand:-
TSS Score:1
Start of the center position in the TSS region:127937499
End of the center position in the TSS region:127937500



Gene and protein annotation


Transcript_name:BC048256
Distance:-16
GeneID:8818
HGNC/MGI_ID:HGNC:3006
UniProt_ID:
Gene_name:dolichyl-phosphate mannosyltransferase subunit 2, regulatory
Gene_symbol:DPM2
Gene_synonyms:MGC111193 MGC21559
Gene_source:HGNC:3006



Transcript annotation


Transcript_name:BC048256
Distance:-16
Num_trans:8818
All_trans:HGNC:3006



TATA-Box annotation


Distance to TSS:985
Nearest PromoterID:NM_003863
Entrez ID:8818
Nearest Unigene:Hs.108973
Nearest Refseq:NM_003863
Nearest Ensembl:ENSG00000136908
Gene Name:dolichyl-phosphate mannosyltransferase subunit 2, regulatory
Gene Alias:CDG1U
Gene Description:dolichyl-phosphate mannosyltransferase subunit 2, regulatory
Gene Type:protein-coding
CpG%:0.075
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):