Difference between revisions of "TSS:Hg 102635.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EEIG1= | ||
| + | |SYM-3A= | ||
| + | |all_trans=NM_203305:-20 BC047949:-20 BC142952:-25 ENST00000373084.8:-28 ENST00000300434.3:-28 BC137087:81 BC137088:81 | ||
| + | |bA203J24.7= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
| + | |end=127950694 | ||
| + | |end_of_center_position=127950682 | ||
|entrez_id=399665 | |entrez_id=399665 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=C9orf132 | + | |gene_alias=C9orf132{{!}}EEIG1{{!}}SYM-3A{{!}}bA203J24.7 |
|gene_description=family with sequence similarity 102 member A | |gene_description=family with sequence similarity 102 member A | ||
| − | |gene_name=FAM102A | + | |gene_id=399665 |
| + | |gene_name=family with sequence similarity 102 member A | ||
| + | |gene_source=HGNC:31419 | ||
| + | |gene_symbol=FAM102A | ||
| + | |gene_synonyms=Eeig1 SYM-3A bA203J24.7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31419 | ||
|nearest_ensembl=ENSG00000167106 | |nearest_ensembl=ENSG00000167106 | ||
|nearest_promoter_id=NM_203305 | |nearest_promoter_id=NM_203305 | ||
|nearest_refseq=NM_203305 | |nearest_refseq=NM_203305 | ||
|nearest_unigene=Hs.535972 | |nearest_unigene=Hs.535972 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=127950668 | ||
| + | |start_of_center_position=127950681 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_203305.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102635.1 | |tss_id=hg_102635.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9C2 | ||
}} | }} | ||
Latest revision as of 18:31, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127950681 |
|---|---|
| End of the center position in the TSS region: | 127950682 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_203305.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | NM_203305:-20 BC047949:-20 BC142952:-25 ENST00000373084.8:-28 ENST00000300434.3:-28 BC137087:81 BC137088:81 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_203305 |
| Entrez ID: | 399665 |
| Nearest Unigene: | Hs.535972 |
| Nearest Refseq: | NM_203305 |
| Nearest Ensembl: | ENSG00000167106 |
| Gene Name: | family with sequence similarity 102 member A |
| Gene Alias: | C9orf132|EEIG1|SYM-3A|bA203J24.7 |
| Gene Description: | family with sequence similarity 102 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
