Difference between revisions of "TSS:Hg 102641.1"
From referenceTSS
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|EEIG1= | |EEIG1= | ||
|SYM-3A= | |SYM-3A= | ||
| − | |all_trans= | + | |all_trans=HGNC:31419 |
|bA203J24.7= | |bA203J24.7= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=455 |
|end=127980542 | |end=127980542 | ||
|end_of_center_position=127980535 | |end_of_center_position=127980535 | ||
|entrez_id=399665 | |entrez_id=399665 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=C9orf132 | + | |gene_alias=C9orf132{{!}}EEIG1{{!}}SYM-3A{{!}}bA203J24.7 |
|gene_description=family with sequence similarity 102 member A | |gene_description=family with sequence similarity 102 member A | ||
|gene_id=399665 | |gene_id=399665 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_203305 | |nearest_refseq=NM_203305 | ||
|nearest_unigene=Hs.535972 | |nearest_unigene=Hs.535972 | ||
| − | |num_trans= | + | |num_trans=399665 |
|species=human | |species=human | ||
|start=127980526 | |start=127980526 | ||
|start_of_center_position=127980534 | |start_of_center_position=127980534 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK058004 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102641.1 | |tss_id=hg_102641.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:31, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127980534 |
|---|---|
| End of the center position in the TSS region: | 127980535 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK058004 |
|---|---|
| Distance: | 0 |
| Num_trans: | 399665 |
| All_trans: | HGNC:31419 |
TATA-Box annotation
| Distance to TSS: | 455 |
|---|---|
| Nearest PromoterID: | NM_001035254 |
| Entrez ID: | 399665 |
| Nearest Unigene: | Hs.535972 |
| Nearest Refseq: | NM_203305 |
| Nearest Ensembl: | ENSG00000167106 |
| Gene Name: | family with sequence similarity 102 member A |
| Gene Alias: | C9orf132|EEIG1|SYM-3A|bA203J24.7 |
| Gene Description: | family with sequence similarity 102 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
