Difference between revisions of "TSS:Hg 10267.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=102302 |entrez_id=54897 |gc_percent=0.492537 |gene_alias=CAS11|CST|SRG|ZNF693|dJ734G22.1 |gene_description=castor zinc finger 1...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CST= | ||
| + | |SRG= | ||
| + | |ZNF693= | ||
| + | |all_trans=HGNC:26002 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss= | + | |dJ734G22.1= |
| + | |distance=-72 | ||
| + | |distance_to_tss=102272 | ||
| + | |end=10694377 | ||
| + | |end_of_center_position=10694375 | ||
|entrez_id=54897 | |entrez_id=54897 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=CAS11 | + | |gene_alias=CAS11{{!}}CST{{!}}SRG{{!}}ZNF693{{!}}dJ734G22.1 |
|gene_description=castor zinc finger 1 | |gene_description=castor zinc finger 1 | ||
| − | |gene_name=CASZ1 | + | |gene_id=54897 |
| + | |gene_name=castor zinc finger 1 | ||
| + | |gene_source=HGNC:26002 | ||
| + | |gene_symbol=CASZ1 | ||
| + | |gene_synonyms=FLJ20321 SRG ZNF693 castor cst | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26002 | ||
|nearest_ensembl=ENSG00000130940 | |nearest_ensembl=ENSG00000130940 | ||
|nearest_promoter_id=NM_001079843 | |nearest_promoter_id=NM_001079843 | ||
|nearest_refseq=NM_017766 | |nearest_refseq=NM_017766 | ||
|nearest_unigene=Hs.439894 | |nearest_unigene=Hs.439894 | ||
| − | |tata_box= | + | |num_trans=54897 |
| + | |species=human | ||
| + | |start=10694371 | ||
| + | |start_of_center_position=10694374 | ||
| + | |strand=- | ||
| + | |tata_box=-32(GCTTTAAAACAA,+,0.00) | ||
| + | |transcript_name=AK311700 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10267.1 | |tss_id=hg_10267.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10694374 |
|---|---|
| End of the center position in the TSS region: | 10694375 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK311700 |
|---|---|
| Distance: | -72 |
| Num_trans: | 54897 |
| All_trans: | HGNC:26002 |
TATA-Box annotation
| Distance to TSS: | 102272 |
|---|---|
| Nearest PromoterID: | NM_001079843 |
| Entrez ID: | 54897 |
| Nearest Unigene: | Hs.439894 |
| Nearest Refseq: | NM_017766 |
| Nearest Ensembl: | ENSG00000130940 |
| Gene Name: | castor zinc finger 1 |
| Gene Alias: | CAS11|CST|SRG|ZNF693|dJ734G22.1 |
| Gene Description: | castor zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCTTTAAAACAA,+,0.00) |
