Difference between revisions of "TSS:Hg 102676.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|NP94= | |NP94= | ||
|ZNF356= | |ZNF356= | ||
| − | |all_trans= | + | |all_trans=HGNC:16744 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=128191597 | |end=128191597 | ||
| + | |end_of_center_position=128191568 | ||
|entrez_id=25792 | |entrez_id=25792 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=LSFR1 | + | |gene_alias=LSFR1{{!}}NP94{{!}}ZNF356 |
|gene_description=CDKN1A interacting zinc finger protein 1 | |gene_description=CDKN1A interacting zinc finger protein 1 | ||
|gene_id=25792 | |gene_id=25792 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:16744 | |hgnc_mgi_id=HGNC:16744 | ||
|nearest_ensembl=ENSG00000148337 | |nearest_ensembl=ENSG00000148337 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001257976 |
|nearest_refseq=NM_012127 | |nearest_refseq=NM_012127 | ||
|nearest_unigene=Hs.212395 | |nearest_unigene=Hs.212395 | ||
| − | |num_trans= | + | |num_trans=25792 |
|species=human | |species=human | ||
|start=128191538 | |start=128191538 | ||
| + | |start_of_center_position=128191567 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000372954.5 ENST00000357558.9 ENST00000629610.2 | + | |transcript_name=ENST00000372954.5 ENST00000372938.10 ENST00000357558.9 ENST00000629610.2 ENST00000476727.6 ENST00000467178.5 BC021163 AK303288 AK303636 AK027287 AK292713 AK316393 AB030835 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102676.1 | |tss_id=hg_102676.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R885 B4E0A3 Q96KB7 Q9ULV3 | + | |uniprot_id=A0A024R885 B4E0A3 Q5SYW2 Q96KB7 Q9ULV3 |
}} | }} | ||
Latest revision as of 18:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128191567 |
|---|---|
| End of the center position in the TSS region: | 128191568 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372954.5 ENST00000372938.10 ENST00000357558.9 ENST00000629610.2 ENST00000476727.6 ENST00000467178.5 BC021163 AK303288 AK303636 AK027287 AK292713 AK316393 AB030835 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25792 |
| All_trans: | HGNC:16744 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001257976 |
| Entrez ID: | 25792 |
| Nearest Unigene: | Hs.212395 |
| Nearest Refseq: | NM_012127 |
| Nearest Ensembl: | ENSG00000148337 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | LSFR1|NP94|ZNF356 |
| Gene Description: | CDKN1A interacting zinc finger protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
