Difference between revisions of "TSS:Hg 102684.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:4425 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=128275971 | |end=128275971 | ||
|end_of_center_position=128275954 | |end_of_center_position=128275954 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4425 | |hgnc_mgi_id=HGNC:4425 | ||
|nearest_ensembl=ENSG00000167110 | |nearest_ensembl=ENSG00000167110 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366244 |
|nearest_refseq=NM_004486 | |nearest_refseq=NM_004486 | ||
|nearest_unigene=Hs.155827 | |nearest_unigene=Hs.155827 | ||
| − | |num_trans= | + | |num_trans=2801 |
|species=human | |species=human | ||
|start=128275935 | |start=128275935 | ||
|start_of_center_position=128275953 | |start_of_center_position=128275953 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000610329.4 | + | |transcript_name=ENST00000610329.4 BX647920 AF248953 CU686726 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102684.1 | |tss_id=hg_102684.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A087WYC0 | + | |uniprot_id=A0A087WYC0 Q08379 Q5HYE0 |
}} | }} | ||
Latest revision as of 18:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128275953 |
|---|---|
| End of the center position in the TSS region: | 128275954 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000610329.4 BX647920 AF248953 CU686726 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2801 |
| All_trans: | HGNC:4425 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001366244 |
| Entrez ID: | 2801 |
| Nearest Unigene: | Hs.155827 |
| Nearest Refseq: | NM_004486 |
| Nearest Ensembl: | ENSG00000167110 |
| Gene Name: | golgin A2 |
| Gene Alias: | GM130 |
| Gene Description: | golgin A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
