Difference between revisions of "TSS:Hg 102686.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|COQ10D7= | |COQ10D7= | ||
| − | |all_trans= | + | |all_trans=HGNC:17170 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015679 | |nearest_refseq=NM_015679 | ||
|nearest_unigene=Hs.632685 | |nearest_unigene=Hs.632685 | ||
| − | |num_trans= | + | |num_trans=26995 |
|species=human | |species=human | ||
|start=128322407 | |start=128322407 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-100(GACTATAAAATG,-,0.00),63(CGGTCTATAAGC,-,0.00) | |tata_box=-100(GACTATAAAATG,-,0.00),63(CGGTCTATAAGC,-,0.00) | ||
| − | |transcript_name=ENST00000372890.6 ENST00000460320.1 | + | |transcript_name=ENST00000372890.6 ENST00000460320.1 AJ420462 AF131848 AK001956 BC001457 DQ892156 DQ895351 CU674714 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102686.1 | |tss_id=hg_102686.1 | ||
Latest revision as of 18:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128322431 |
|---|---|
| End of the center position in the TSS region: | 128322432 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372890.6 ENST00000460320.1 AJ420462 AF131848 AK001956 BC001457 DQ892156 DQ895351 CU674714 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26995 |
| All_trans: | HGNC:17170 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_015679 |
| Entrez ID: | 26995 |
| Nearest Unigene: | Hs.632685 |
| Nearest Refseq: | NM_015679 |
| Nearest Ensembl: | ENSG00000167112 |
| Gene Name: | TruB pseudouridine synthase family member 2 |
| Gene Alias: | CLONE24922 |
| Gene Description: | TruB pseudouridine synthase family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(GACTATAAAATG,-,0.00),63(CGGTCTATAAGC,-,0.00) |
