Difference between revisions of "TSS:Hg 102701.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |I2PP2A= | ||
| + | |IGAAD= | ||
| + | |IPP2A2= | ||
| + | |PHAPII= | ||
| + | |TAF-I= | ||
| + | |TAF-IBETA= | ||
| + | |all_trans=HGNC:39093 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-602 | ||
| + | |end=128684487 | ||
| + | |end_of_center_position=128684471 | ||
|entrez_id=6418 | |entrez_id=6418 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=2PP2A | + | |gene_alias=2PP2A{{!}}I2PP2A{{!}}IGAAD{{!}}IPP2A2{{!}}MRD58{{!}}PHAPII{{!}}TAF-I{{!}}TAF-IBETA |
|gene_description=SET nuclear proto-oncogene | |gene_description=SET nuclear proto-oncogene | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=high mobility group AT-hook 1 pseudogene 4 | ||
| + | |gene_source=HGNC:39093 | ||
| + | |gene_symbol=HMGA1P4 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:39093 | ||
|nearest_ensembl=ENSG00000119335 | |nearest_ensembl=ENSG00000119335 | ||
|nearest_promoter_id=NM_001248000 | |nearest_promoter_id=NM_001248000 | ||
|nearest_refseq=NM_003011 | |nearest_refseq=NM_003011 | ||
|nearest_unigene=Hs.436687 | |nearest_unigene=Hs.436687 | ||
| + | |num_trans= | ||
| + | |species=human | ||
| + | |start=128684453 | ||
| + | |start_of_center_position=128684470 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000652876.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102701.1 | |tss_id=hg_102701.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128684470 |
|---|---|
| End of the center position in the TSS region: | 128684471 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000652876.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | HGNC:39093 |
TATA-Box annotation
| Distance to TSS: | -602 |
|---|---|
| Nearest PromoterID: | NM_001248000 |
| Entrez ID: | 6418 |
| Nearest Unigene: | Hs.436687 |
| Nearest Refseq: | NM_003011 |
| Nearest Ensembl: | ENSG00000119335 |
| Gene Name: | high mobility group AT-hook 1 pseudogene 4 |
| Gene Alias: | 2PP2A|I2PP2A|IGAAD|IPP2A2|MRD58|PHAPII|TAF-I|TAF-IBETA |
| Gene Description: | SET nuclear proto-oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
