Difference between revisions of "TSS:Hg 102710.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|CENP-32= | |CENP-32= | ||
|HSPC109= | |HSPC109= | ||
| − | |all_trans= | + | |all_trans=HGNC:26933 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-6 |
|end=128829821 | |end=128829821 | ||
| + | |end_of_center_position=128829801 | ||
|entrez_id=51490 | |entrez_id=51490 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=C9orf114 | + | |gene_alias=C9orf114{{!}}CENP-32{{!}}CENP32{{!}}HSPC109 |
|gene_description=SPOUT domain containing methyltransferase 1 | |gene_description=SPOUT domain containing methyltransferase 1 | ||
|gene_id=51490 | |gene_id=51490 | ||
| − | |gene_name= | + | |gene_name=SPOUT domain containing methyltransferase 1 |
|gene_source=HGNC:26933 | |gene_source=HGNC:26933 | ||
| − | |gene_symbol= | + | |gene_symbol=SPOUT1 |
|gene_synonyms=CENP-32 HSPC109 | |gene_synonyms=CENP-32 HSPC109 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_016390 | |nearest_refseq=NM_016390 | ||
|nearest_unigene=Hs.224137 | |nearest_unigene=Hs.224137 | ||
| − | |num_trans= | + | |num_trans=51490 |
|species=human | |species=human | ||
|start=128829779 | |start=128829779 | ||
| + | |start_of_center_position=128829800 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000361256. | + | |transcript_name=ENST00000361256.10 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102710.1 | |tss_id=hg_102710.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B4E0X4 Q5T280 Q9P041 |
}} | }} | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128829800 |
|---|---|
| End of the center position in the TSS region: | 128829801 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000361256.10 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792 |
|---|---|
| Distance: | 0 |
| Num_trans: | 51490 |
| All_trans: | HGNC:26933 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_016390 |
| Entrez ID: | 51490 |
| Nearest Unigene: | Hs.224137 |
| Nearest Refseq: | NM_016390 |
| Nearest Ensembl: | ENSG00000198917 |
| Gene Name: | SPOUT domain containing methyltransferase 1 |
| Gene Alias: | C9orf114|CENP-32|CENP32|HSPC109 |
| Gene Description: | SPOUT domain containing methyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
