Difference between revisions of "TSS:Hg 102713.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|KAT1= | |KAT1= | ||
|KATI= | |KATI= | ||
| − | |all_trans= | + | |all_trans=HGNC:1564 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 9: | Line 9: | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=128882089 | |end=128882089 | ||
| + | |end_of_center_position=128882059 | ||
|entrez_id=883 | |entrez_id=883 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=CCBL1 | + | |gene_alias=CCBL1{{!}}GTK{{!}}KAT1{{!}}KATI |
|gene_description=kynurenine aminotransferase 1 | |gene_description=kynurenine aminotransferase 1 | ||
|gene_id=883 | |gene_id=883 | ||
| − | |gene_name= | + | |gene_name=kynurenine aminotransferase 1 |
|gene_source=HGNC:1564 | |gene_source=HGNC:1564 | ||
| − | |gene_symbol= | + | |gene_symbol=KYAT1 |
|gene_synonyms=GTK KATI | |gene_synonyms=GTK KATI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:1564 | |hgnc_mgi_id=HGNC:1564 | ||
|nearest_ensembl=ENSG00000171097 | |nearest_ensembl=ENSG00000171097 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001352991 |
|nearest_refseq=NM_004059 | |nearest_refseq=NM_004059 | ||
|nearest_unigene=Hs.495250 | |nearest_unigene=Hs.495250 | ||
| − | |num_trans= | + | |num_trans=883 |
|species=human | |species=human | ||
|start=128882027 | |start=128882027 | ||
| + | |start_of_center_position=128882058 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=86(CCCCCTTAAAGG,-,0.00),87(CCCCTTAAAGGG,+,0.00),87(CCCCTTAAAGGG,-,0.00),88(CCCTTAAAGGGA,+,0.00),89(CCTTAAAGGGAC,+,0.00) |
| − | |transcript_name=ENST00000462722 | + | |transcript_name=ENST00000462722.5 BC021262 AK291178 BC022468 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102713.1 | |tss_id=hg_102713.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B7Z4W5 Q16773 |
}} | }} | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128882058 |
|---|---|
| End of the center position in the TSS region: | 128882059 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000462722.5 BC021262 AK291178 BC022468 |
|---|---|
| Distance: | 0 |
| Num_trans: | 883 |
| All_trans: | HGNC:1564 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001352991 |
| Entrez ID: | 883 |
| Nearest Unigene: | Hs.495250 |
| Nearest Refseq: | NM_004059 |
| Nearest Ensembl: | ENSG00000171097 |
| Gene Name: | kynurenine aminotransferase 1 |
| Gene Alias: | CCBL1|GTK|KAT1|KATI |
| Gene Description: | kynurenine aminotransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 86(CCCCCTTAAAGG,-,0.00),87(CCCCTTAAAGGG,+,0.00),87(CCCCTTAAAGGG,-,0.00),88(CCCTTAAAGGGA,+,0.00),89(CCTTAAAGGGAC,+,0.00) |
