Difference between revisions of "TSS:Hg 102721.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=139 |entrez_id=56904 |gc_percent=0.800995 |gene_alias=PP6569|PP9455|RRIG1 |gene_description=SH3 domain containing GRB2 like end...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PP9455= | ||
| + | |RRIG1= | ||
| + | |all_trans=HGNC:10834 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=117 | ||
| + | |end=129028240 | ||
| + | |end_of_center_position=129028214 | ||
|entrez_id=56904 | |entrez_id=56904 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=PP6569 | + | |gene_alias=PP6569{{!}}PP9455{{!}}RRIG1 |
| − | |gene_description=SH3 domain containing GRB2 like endophilin B2 | + | |gene_description=SH3 domain containing GRB2 like, endophilin B2 |
| − | |gene_name=SH3GLB2 | + | |gene_id=56904 |
| + | |gene_name=SH3 domain containing GRB2 like, endophilin B2 | ||
| + | |gene_source=HGNC:10834 | ||
| + | |gene_symbol=SH3GLB2 | ||
| + | |gene_synonyms=KIAA1848 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10834 | ||
|nearest_ensembl=ENSG00000148341 | |nearest_ensembl=ENSG00000148341 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_163192 |
|nearest_refseq=NM_020145 | |nearest_refseq=NM_020145 | ||
|nearest_unigene=Hs.460238 | |nearest_unigene=Hs.460238 | ||
| + | |num_trans=56904 | ||
| + | |species=human | ||
| + | |start=129028187 | ||
| + | |start_of_center_position=129028213 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372559.5 ENST00000416629.5 ENST00000416230.1 AF257319 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102721.1 | |tss_id=hg_102721.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R896 B7ZC39 F8WFB9 | ||
}} | }} | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129028213 |
|---|---|
| End of the center position in the TSS region: | 129028214 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372559.5 ENST00000416629.5 ENST00000416230.1 AF257319 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56904 |
| All_trans: | HGNC:10834 |
TATA-Box annotation
| Distance to TSS: | 117 |
|---|---|
| Nearest PromoterID: | NR_163192 |
| Entrez ID: | 56904 |
| Nearest Unigene: | Hs.460238 |
| Nearest Refseq: | NM_020145 |
| Nearest Ensembl: | ENSG00000148341 |
| Gene Name: | SH3 domain containing GRB2 like, endophilin B2 |
| Gene Alias: | PP6569|PP9455|RRIG1 |
| Gene Description: | SH3 domain containing GRB2 like, endophilin B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
