Difference between revisions of "TSS:Hg 102733.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |PPP2R4= | ||
| + | |PR53= | ||
| + | |all_trans=HGNC:2342 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=89 | ||
|distance_to_tss=-32 | |distance_to_tss=-32 | ||
| + | |end=129111286 | ||
| + | |end_of_center_position=129111282 | ||
|entrez_id=5524 | |entrez_id=5524 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=PP2A | + | |gene_alias=PP2A{{!}}PPP2R4{{!}}PR53 |
|gene_description=protein phosphatase 2 phosphatase activator | |gene_description=protein phosphatase 2 phosphatase activator | ||
| − | |gene_name= | + | |gene_id=1384 |
| + | |gene_name=carnitine O-acetyltransferase | ||
| + | |gene_source=HGNC:2342 | ||
| + | |gene_symbol=CRAT | ||
| + | |gene_synonyms=CAT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2342 | ||
|nearest_ensembl=ENSG00000119383 | |nearest_ensembl=ENSG00000119383 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_178001 |
|nearest_refseq=NM_021131 | |nearest_refseq=NM_021131 | ||
|nearest_unigene=Hs.400740 | |nearest_unigene=Hs.400740 | ||
| + | |num_trans=1384 | ||
| + | |species=human | ||
| + | |start=129111277 | ||
| + | |start_of_center_position=129111281 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000464290.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102733.1 | |tss_id=hg_102733.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 129111281 |
|---|---|
| End of the center position in the TSS region: | 129111282 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000464290.5 |
|---|---|
| Distance: | 89 |
| Num_trans: | 1384 |
| All_trans: | HGNC:2342 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_178001 |
| Entrez ID: | 5524 |
| Nearest Unigene: | Hs.400740 |
| Nearest Refseq: | NM_021131 |
| Nearest Ensembl: | ENSG00000119383 |
| Gene Name: | carnitine O-acetyltransferase |
| Gene Alias: | PP2A|PPP2R4|PR53 |
| Gene Description: | protein phosphatase 2 phosphatase activator |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
