Difference between revisions of "TSS:Hg 102777.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17069 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=17798 | |distance_to_tss=17798 | ||
|end=129887409 | |end=129887409 | ||
| + | |end_of_center_position=129887404 | ||
|entrez_id=102466750 | |entrez_id=102466750 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_106914 | |nearest_refseq=NR_106914 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=23048 |
|species=human | |species=human | ||
|start=129887397 | |start=129887397 | ||
| + | |start_of_center_position=129887403 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(CTTTTTAAAAAG,+,0.00),-34(CTTTTTAAAAAG,-,0.00) |
|transcript_name=BC018159 | |transcript_name=BC018159 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:34, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129887403 |
|---|---|
| End of the center position in the TSS region: | 129887404 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC018159 |
|---|---|
| Distance: | -351 |
| Num_trans: | 23048 |
| All_trans: | HGNC:17069 |
TATA-Box annotation
| Distance to TSS: | 17798 |
|---|---|
| Nearest PromoterID: | NR_106914 |
| Entrez ID: | 102466750 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106914 |
| Nearest Ensembl: | ENSG00000276124 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | hsa-mir-6855 |
| Gene Description: | microRNA 6855 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CTTTTTAAAAAG,+,0.00),-34(CTTTTTAAAAAG,-,0.00) |
