Difference between revisions of "TSS:Hg 102778.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:17069 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-331 | ||
|distance_to_tss=17817 | |distance_to_tss=17817 | ||
| + | |end=129887429 | ||
| + | |end_of_center_position=129887422 | ||
|entrez_id=102466750 | |entrez_id=102466750 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
|gene_alias=hsa-mir-6855 | |gene_alias=hsa-mir-6855 | ||
|gene_description=microRNA 6855 | |gene_description=microRNA 6855 | ||
| − | |gene_name= | + | |gene_id=23048 |
| + | |gene_name=formin binding protein 1 | ||
| + | |gene_source=HGNC:17069 | ||
| + | |gene_symbol=FNBP1 | ||
| + | |gene_synonyms=FBP17 KIAA0554 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:17069 | ||
|nearest_ensembl=ENSG00000276124 | |nearest_ensembl=ENSG00000276124 | ||
|nearest_promoter_id=NR_106914 | |nearest_promoter_id=NR_106914 | ||
|nearest_refseq=NR_106914 | |nearest_refseq=NR_106914 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |tata_box= | + | |num_trans=23048 |
| + | |species=human | ||
| + | |start=129887414 | ||
| + | |start_of_center_position=129887421 | ||
| + | |strand=- | ||
| + | |tata_box=-15(CTTTTTAAAAAG,+,0.00),-15(CTTTTTAAAAAG,-,0.00) | ||
| + | |transcript_name=BC018159 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102778.1 | |tss_id=hg_102778.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:34, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 129887421 |
|---|---|
| End of the center position in the TSS region: | 129887422 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC018159 |
|---|---|
| Distance: | -331 |
| Num_trans: | 23048 |
| All_trans: | HGNC:17069 |
TATA-Box annotation
| Distance to TSS: | 17817 |
|---|---|
| Nearest PromoterID: | NR_106914 |
| Entrez ID: | 102466750 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106914 |
| Nearest Ensembl: | ENSG00000276124 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | hsa-mir-6855 |
| Gene Description: | microRNA 6855 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -15(CTTTTTAAAAAG,+,0.00),-15(CTTTTTAAAAAG,-,0.00) |
