Difference between revisions of "TSS:Hg 102798.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17069 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=6 | |distance=6 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-32 |
|end=130043243 | |end=130043243 | ||
|end_of_center_position=130043222 | |end_of_center_position=130043222 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17069 | |hgnc_mgi_id=HGNC:17069 | ||
|nearest_ensembl=ENSG00000187239 | |nearest_ensembl=ENSG00000187239 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363755 |
|nearest_refseq=NM_015033 | |nearest_refseq=NM_015033 | ||
|nearest_unigene=Hs.189409 | |nearest_unigene=Hs.189409 | ||
| − | |num_trans= | + | |num_trans=23048 |
|species=human | |species=human | ||
|start=130043199 | |start=130043199 | ||
|start_of_center_position=130043221 | |start_of_center_position=130043221 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000443566.6 ENST00000420781.5 | + | |transcript_name=ENST00000443566.6 ENST00000420781.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102798.1 | |tss_id=hg_102798.1 | ||
Latest revision as of 18:35, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 130043221 |
|---|---|
| End of the center position in the TSS region: | 130043222 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000443566.6 ENST00000420781.5 |
|---|---|
| Distance: | 6 |
| Num_trans: | 23048 |
| All_trans: | HGNC:17069 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_001363755 |
| Entrez ID: | 23048 |
| Nearest Unigene: | Hs.189409 |
| Nearest Refseq: | NM_015033 |
| Nearest Ensembl: | ENSG00000187239 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | FBP17 |
| Gene Description: | formin binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
