Difference between revisions of "TSS:Hg 10284.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|SPS1= | |SPS1= | ||
|SRML1= | |SRML1= | ||
| − | |all_trans= | + | |all_trans=HGNC:11296 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-14 | |distance=-14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1169 |
|end=11058859 | |end=11058859 | ||
| + | |end_of_center_position=11058850 | ||
|entrez_id=6723 | |entrez_id=6723 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=PAPT | + | |gene_alias=PAPT{{!}}SPDSY{{!}}SPS1{{!}}SRML1 |
|gene_description=spermidine synthase | |gene_description=spermidine synthase | ||
|gene_id=6723 | |gene_id=6723 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_003132 | |nearest_refseq=NM_003132 | ||
|nearest_unigene=Hs.76244 | |nearest_unigene=Hs.76244 | ||
| − | |num_trans= | + | |num_trans=6723 |
|species=human | |species=human | ||
|start=11058839 | |start=11058839 | ||
| + | |start_of_center_position=11058849 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000465788 | + | |transcript_name=ENST00000465788.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10284.1 | |tss_id=hg_10284.1 | ||
Latest revision as of 18:36, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11058849 |
|---|---|
| End of the center position in the TSS region: | 11058850 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000465788.1 |
|---|---|
| Distance: | -14 |
| Num_trans: | 6723 |
| All_trans: | HGNC:11296 |
TATA-Box annotation
| Distance to TSS: | 1169 |
|---|---|
| Nearest PromoterID: | NM_003132 |
| Entrez ID: | 6723 |
| Nearest Unigene: | Hs.76244 |
| Nearest Refseq: | NM_003132 |
| Nearest Ensembl: | ENSG00000116649 |
| Gene Name: | spermidine synthase |
| Gene Alias: | PAPT|SPDSY|SPS1|SRML1 |
| Gene Description: | spermidine synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
