Difference between revisions of "TSS:Hg 102840.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |GRF2= | ||
| + | |all_trans=HGNC:4568 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=104 |
| − | |entrez_id= | + | |distance_to_tss=76482 |
| + | |end=131622015 | ||
| + | |end_of_center_position=131622005 | ||
| + | |entrez_id=642515 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias= | + | |gene_alias=DSPD2{{!}}IFITMD8 |
| − | | | + | |gene_description=proline rich transmembrane protein 1B |
| − | | | + | |gene_id=2889 |
| + | |gene_name=Rap guanine nucleotide exchange factor 1 | ||
| + | |gene_source=HGNC:4568 | ||
| + | |gene_symbol=RAPGEF1 | ||
| + | |gene_synonyms=C3G | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:4568 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000283526 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_001365666 |
| − | |nearest_unigene= | + | |nearest_refseq=NM_001365666 |
| + | |nearest_unigene= | ||
| + | |num_trans=2889 | ||
| + | |species=human | ||
| + | |start=131621994 | ||
| + | |start_of_center_position=131622004 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102840.1 | |tss_id=hg_102840.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A5XEI4 A5XEI5 A5XEI6 A5XEI7 A5XEI8 A5XEI9 A5XEJ0 A5XEJ1 | ||
}} | }} | ||
Latest revision as of 18:36, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131622004 |
|---|---|
| End of the center position in the TSS region: | 131622005 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684 |
|---|---|
| Distance: | 104 |
| Num_trans: | 2889 |
| All_trans: | HGNC:4568 |
TATA-Box annotation
| Distance to TSS: | 76482 |
|---|---|
| Nearest PromoterID: | NM_001365666 |
| Entrez ID: | 642515 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001365666 |
| Nearest Ensembl: | ENSG00000283526 |
| Gene Name: | Rap guanine nucleotide exchange factor 1 |
| Gene Alias: | DSPD2|IFITMD8 |
| Gene Description: | proline rich transmembrane protein 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
