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Difference between revisions of "TSS:Hg 102855.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|GRF2=
 
|GRF2=
|all_trans=KX533477:143 NM_001377936:290
+
|all_trans=HGNC:4568
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 23: Line 23:
 
|nearest_refseq=NM_005312
 
|nearest_refseq=NM_005312
 
|nearest_unigene=Hs.127897
 
|nearest_unigene=Hs.127897
|num_trans=2
+
|num_trans=2889
 
|species=human
 
|species=human
 
|start=131651692
 
|start=131651692

Latest revision as of 18:36, 19 July 2021

Basic information about the TSS


TSS ID:hg_102855.1
Species:human
Chr:chr9
TSS Classification:no
Start:131651692
End:131651714
Strand:-
TSS Score:1
Start of the center position in the TSS region:131651703
End of the center position in the TSS region:131651704



Gene and protein annotation


Transcript_name:KX533477
Distance:143
GeneID:2889
HGNC/MGI_ID:HGNC:4568
UniProt_ID:A0A1S5UYZ7
Gene_name:Rap guanine nucleotide exchange factor 1
Gene_symbol:RAPGEF1
Gene_synonyms:C3G
Gene_source:HGNC:4568



Transcript annotation


Transcript_name:KX533477
Distance:143
Num_trans:2889
All_trans:HGNC:4568



TATA-Box annotation


Distance to TSS:58139
Nearest PromoterID:NM_198679
Entrez ID:2889
Nearest Unigene:Hs.127897
Nearest Refseq:NM_005312
Nearest Ensembl:ENSG00000107263
Gene Name:Rap guanine nucleotide exchange factor 1
Gene Alias:C3G|GRF2
Gene Description:Rap guanine nucleotide exchange factor 1
Gene Type:protein-coding
CpG%:0.005
GC%:0.328358
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):