Difference between revisions of "TSS:Hg 102882.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|MED3= | |MED3= | ||
|TRAP37= | |TRAP37= | ||
| − | |all_trans= | + | |all_trans=HGNC:2377 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=132079874 | |end=132079874 | ||
| + | |end_of_center_position=132079867 | ||
|entrez_id=9442 | |entrez_id=9442 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=CRAP34 | + | |gene_alias=CRAP34{{!}}CRSP34{{!}}CRSP8{{!}}MED3{{!}}TRAP37 |
|gene_description=mediator complex subunit 27 | |gene_description=mediator complex subunit 27 | ||
|gene_id=9442 | |gene_id=9442 | ||
| Line 25: | Line 26: | ||
|nearest_refseq=NM_004269 | |nearest_refseq=NM_004269 | ||
|nearest_unigene=Hs.374262 | |nearest_unigene=Hs.374262 | ||
| − | |num_trans= | + | |num_trans=9442 |
|species=human | |species=human | ||
|start=132079859 | |start=132079859 | ||
| + | |start_of_center_position=132079866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000357028.6 ENST00000474263.1 | + | |transcript_name=ENST00000357028.6 ENST00000292035.10 ENST00000650776.1 ENST00000474263.1 BC002878 GQ900957 AK316345 AK298436 HG518166 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102882.1 | |tss_id=hg_102882.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q6P2C8 U4Q365 | + | |uniprot_id=A0A024R8B7 A0A384N6D1 Q6P2C8 U4Q365 |
}} | }} | ||
Latest revision as of 18:36, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132079866 |
|---|---|
| End of the center position in the TSS region: | 132079867 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000357028.6 ENST00000292035.10 ENST00000650776.1 ENST00000474263.1 BC002878 GQ900957 AK316345 AK298436 HG518166 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9442 |
| All_trans: | HGNC:2377 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001253882 |
| Entrez ID: | 9442 |
| Nearest Unigene: | Hs.374262 |
| Nearest Refseq: | NM_004269 |
| Nearest Ensembl: | ENSG00000160563 |
| Gene Name: | mediator complex subunit 27 |
| Gene Alias: | CRAP34|CRSP34|CRSP8|MED3|TRAP37 |
| Gene Description: | mediator complex subunit 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
