Difference between revisions of "TSS:Hg 102893.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|AOA2= | |AOA2= | ||
|SCAR1= | |SCAR1= | ||
| − | |all_trans= | + | |all_trans=HGNC:445 |
|bA479K20.2= | |bA479K20.2= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-23 | |distance=-23 | ||
| − | |distance_to_tss= | + | |distance_to_tss=45 |
|end=132354946 | |end=132354946 | ||
| + | |end_of_center_position=132354941 | ||
|entrez_id=23064 | |entrez_id=23064 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=ALS4 | + | |gene_alias=ALS4{{!}}AOA2{{!}}SCAN2{{!}}SCAR1{{!}}Sen1{{!}}bA479K20.2 |
|gene_description=senataxin | |gene_description=senataxin | ||
|gene_id=23064 | |gene_id=23064 | ||
| Line 17: | Line 18: | ||
|gene_source=HGNC:445 | |gene_source=HGNC:445 | ||
|gene_symbol=SETX | |gene_symbol=SETX | ||
| − | |gene_synonyms=AOA2 KIAA0625 | + | |gene_synonyms=AOA2 KIAA0625 Sen1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:445 | |hgnc_mgi_id=HGNC:445 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_015046 | |nearest_refseq=NM_015046 | ||
|nearest_unigene=Hs.460317 | |nearest_unigene=Hs.460317 | ||
| − | |num_trans= | + | |num_trans=23064 |
|species=human | |species=human | ||
|start=132354935 | |start=132354935 | ||
| + | |start_of_center_position=132354940 | ||
|strand=- | |strand=- | ||
|transcript_name=BX537849 AK307608 | |transcript_name=BX537849 AK307608 | ||
Latest revision as of 18:37, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132354940 |
|---|---|
| End of the center position in the TSS region: | 132354941 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX537849 AK307608 |
|---|---|
| Distance: | -23 |
| Num_trans: | 23064 |
| All_trans: | HGNC:445 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_015046 |
| Entrez ID: | 23064 |
| Nearest Unigene: | Hs.460317 |
| Nearest Refseq: | NM_015046 |
| Nearest Ensembl: | ENSG00000107290 |
| Gene Name: | senataxin |
| Gene Alias: | ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 |
| Gene Description: | senataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
