Difference between revisions of "TSS:Hg 102905.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|TFIIIC90= | |TFIIIC90= | ||
|TFIIICDELTA= | |TFIIICDELTA= | ||
| − | |all_trans= | + | |all_trans=HGNC:16715 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=132669966 | |end=132669966 | ||
| − | |entrez_id= | + | |end_of_center_position=132669952 |
| + | |entrez_id=64794 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias= | + | |gene_alias=PPP1R25 |
| − | |gene_description= | + | |gene_description=DEAD-box helicase 31 |
|gene_id=64794 | |gene_id=64794 | ||
|gene_name=DEAD-box helicase 31 | |gene_name=DEAD-box helicase 31 | ||
| Line 22: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16715 | |hgnc_mgi_id=HGNC:16715 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000125485 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001322341 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_022779 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.660767 |
| − | |num_trans= | + | |num_trans=64794 |
|species=human | |species=human | ||
|start=132669936 | |start=132669936 | ||
| + | |start_of_center_position=132669951 | ||
|strand=- | |strand=- | ||
|transcript_name=AK225121 | |transcript_name=AK225121 | ||
Latest revision as of 18:37, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132669951 |
|---|---|
| End of the center position in the TSS region: | 132669952 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK225121 |
|---|---|
| Distance: | 0 |
| Num_trans: | 64794 |
| All_trans: | HGNC:16715 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001322341 |
| Entrez ID: | 64794 |
| Nearest Unigene: | Hs.660767 |
| Nearest Refseq: | NM_022779 |
| Nearest Ensembl: | ENSG00000125485 |
| Gene Name: | DEAD-box helicase 31 |
| Gene Alias: | PPP1R25 |
| Gene Description: | DEAD-box helicase 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
