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Difference between revisions of "TSS:Hg 102918.1"

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{{TSSDetail
 
{{TSSDetail
 
|TSC=
 
|TSC=
|all_trans=AB190910:0 BC121000:0 BC047772:-7 ENST00000647279.1:-9 ENST00000490179.3:-13 ENST00000643583.1:-16 ENST00000642344.1:16 ENST00000644997.1:16 ENST00000298552.9:-17 ENST00000643072.1:-17 ENST00000642745.1:-17 ENST00000647462.1:-17 ENST00000645904.1:-17 ENST00000646831.1:-17 NM_001162427:-17 NM_001362177:-17 NM_001162426:-17 NM_000368:-17 AK303030:-17 AK308412:-17 ENST00000643875.1:-18 ENST00000642627.1:-20 ENST00000642811.1:-20 ENST00000475903.6:-20 AK297326:-20 AF013168:-22 ENST00000642617.1:-24 BC108668:-24 ENST00000644255.1:-27 ENST00000647506.1:-28 ENST00000642646.1:-28 ENST00000646788.1:30 ENST00000645901.1:-32 ENST00000646625.1:-34 ENST00000646391.1:-34 ENST00000645150.1:-34 ENST00000645129.1:-34 ENST00000403810.6:-34 ENST00000643691.1:-34 AK299654:-34 BC070032:-34 ENST00000645346.1:35 ENST00000642854.1:-95 ENST00000644097.1:-170 ENST00000642249.1:-235
+
|all_trans=HGNC:12362
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NM_000368
 
|nearest_refseq=NM_000368
 
|nearest_unigene=Hs.370854
 
|nearest_unigene=Hs.370854
|num_trans=45
+
|num_trans=7248
 
|species=human
 
|species=human
 
|start=132944587
 
|start=132944587

Latest revision as of 18:37, 19 July 2021

Basic information about the TSS


TSS ID:hg_102918.1
Species:human
Chr:chr9
TSS Classification:yes
Start:132944587
End:132944599
Strand:-
TSS Score:1
Start of the center position in the TSS region:132944593
End of the center position in the TSS region:132944594



Gene and protein annotation


Transcript_name:AB190910 BC121000
Distance:0
GeneID:7248
HGNC/MGI_ID:HGNC:12362
UniProt_ID:Q0VAM5
Gene_name:TSC complex subunit 1
Gene_symbol:TSC1
Gene_synonyms:KIAA0243 LAM hamartin
Gene_source:HGNC:12362



Transcript annotation


Transcript_name:AB190910 BC121000
Distance:0
Num_trans:7248
All_trans:HGNC:12362



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NM_001362177
Entrez ID:7248
Nearest Unigene:Hs.370854
Nearest Refseq:NM_000368
Nearest Ensembl:ENSG00000165699
Gene Name:TSC complex subunit 1
Gene Alias:LAM|TSC
Gene Description:TSC complex subunit 1
Gene Type:protein-coding
CpG%:0.06
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):74(TCCTTTTTATGG,-,0.00),76(CTTTTTATGGGG,+,0.00)