Difference between revisions of "TSS:Hg 102955.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|RGF= | |RGF= | ||
|RalGEF= | |RalGEF= | ||
| − | |all_trans= | + | |all_trans=NM_001271774:23 ENST00000372062.8:63 AK301470:63 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 8: | Line 8: | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
|end=133131194 | |end=133131194 | ||
| + | |end_of_center_position=133131187 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=RGDS | + | |gene_alias=RGDS{{!}}RGF{{!}}RalGEF |
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
|gene_id=5900 | |gene_id=5900 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=133131179 | |start=133131179 | ||
| + | |start_of_center_position=133131186 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001271774.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102955.1 | |tss_id=hg_102955.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8N4Y1 |
}} | }} | ||
Latest revision as of 18:38, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133131186 |
|---|---|
| End of the center position in the TSS region: | 133131187 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001271774.2 |
|---|---|
| Distance: | 23 |
| Num_trans: | 3 |
| All_trans: | NM_001271774:23 ENST00000372062.8:63 AK301470:63 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_001271774 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS|RGF|RalGEF |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
