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Difference between revisions of "TSS:Hg 102969.1"

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Line 2: Line 2:
 
|FS=
 
|FS=
 
|UNQ2513=
 
|UNQ2513=
|all_trans=ENST00000645973.1:0 ENST00000372043.7:9 ENST00000470431.5:9 ENST00000472281.5:9 ENST00000647146.1:14 ENST00000372040.9:14 ENST00000540636.6:14 ENST00000646215.1:14 ENST00000642916.1:14 NM_001288573:14 NM_001282632:14 NM_001288572:14 NM_001282629:14 NM_021996:14 AK293997:14 AK074944:14 AK291498:14 AK303825:14 AK307687:14 AK314097:14 AK074639:16 AF163572:17 ENST00000487864.1:27 ENST00000372038.7:31 BC032499:31 ENST00000372036.4:33 AY358175:34 ENST00000644196.1:226
+
|all_trans=HGNC:20460
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 24: Line 24:
 
|nearest_refseq=NM_021996
 
|nearest_refseq=NM_021996
 
|nearest_unigene=Hs.495419
 
|nearest_unigene=Hs.495419
|num_trans=28
+
|num_trans=26301
 
|species=human
 
|species=human
 
|start=133163927
 
|start=133163927

Latest revision as of 18:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_102969.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133163927
End:133163982
Strand:-
TSS Score:1
Start of the center position in the TSS region:133163954
End of the center position in the TSS region:133163955



Gene and protein annotation


Transcript_name:ENST00000645973.1
Distance:0
GeneID:26301
HGNC/MGI_ID:HGNC:20460
UniProt_ID:
Gene_name:globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
Gene_symbol:GBGT1
Gene_synonyms:A3GALNT FS MGC44848 UDP-GalNAc
Gene_source:HGNC:20460



Transcript annotation


Transcript_name:ENST00000645973.1
Distance:0
Num_trans:26301
All_trans:HGNC:20460



TATA-Box annotation


Distance to TSS:-41
Nearest PromoterID:NM_001282629
Entrez ID:26301
Nearest Unigene:Hs.495419
Nearest Refseq:NM_021996
Nearest Ensembl:ENSG00000148288
Gene Name:globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
Gene Alias:A3GALNT|FS|UNQ2513
Gene Description:globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
Gene Type:protein-coding
CpG%:0.075
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):