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Difference between revisions of "TSS:Hg 102982.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC014878:0 EU831789:8 EU831867:8 BC003001:12 BC006197:12 KJ892233:16 AK054884:-39 NR_103874:-42 NM_006753:-42 NM_001278942:-42 ENST00000372022.5:-230 uc004cdb.6:-230
+
|all_trans=HGNC:11478
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
 
|distance=0
 
|distance=0
|distance_to_tss=52
+
|distance_to_tss=30
 
|end=133336168
 
|end=133336168
 +
|end_of_center_position=133336159
 
|entrez_id=6838
 
|entrez_id=6838
 
|gc_percent=0.691542
 
|gc_percent=0.691542
Line 21: Line 22:
 
|nearest_refseq=NM_006753
 
|nearest_refseq=NM_006753
 
|nearest_unigene=Hs.274430
 
|nearest_unigene=Hs.274430
|num_trans=12
+
|num_trans=6838
 
|species=human
 
|species=human
 
|start=133336148
 
|start=133336148
 +
|start_of_center_position=133336158
 
|strand=-
 
|strand=-
 
|transcript_name=BC014878
 
|transcript_name=BC014878

Latest revision as of 18:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_102982.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133336148
End:133336168
Strand:-
TSS Score:1
Start of the center position in the TSS region:133336158
End of the center position in the TSS region:133336159



Gene and protein annotation


Transcript_name:BC014878
Distance:0
GeneID:6838
HGNC/MGI_ID:HGNC:11478
UniProt_ID:
Gene_name:surfeit 6
Gene_symbol:SURF6
Gene_synonyms:FLJ30322 RRP14
Gene_source:HGNC:11478



Transcript annotation


Transcript_name:BC014878
Distance:0
Num_trans:6838
All_trans:HGNC:11478



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NR_103874
Entrez ID:6838
Nearest Unigene:Hs.274430
Nearest Refseq:NM_006753
Nearest Ensembl:ENSG00000148296
Gene Name:surfeit 6
Gene Alias:RRP14
Gene Description:surfeit 6
Gene Type:protein-coding
CpG%:0.12
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):