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Difference between revisions of "TSS:Hg 102996.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC111023:0 BX647961:5 ENST00000371991.3:-9 ENST00000371982.3:14 AF078866:-24 AF078867:-24 AK293434:24 AK300004:-25 ENST00000371989.8:-26 NM_001280789:-26 NM_033161:-26 AK299656:-26 AK303309:-26 AK316480:-26 AK295435:-29 ENST00000467910.5:33 BC018741:35 AB528538:50 DQ892024:53 DQ895216:53 AM392907:53 KJ892231:54 CU676306:54 ENST00000485435.6:-65 Y14820:76 AK315488:-84 ENST00000545297.5:-132 ENST00000613129.4:-132 ENST00000618229.4:-132 NM_001280792:-132 NM_001280791:-132 NM_001280793:-132 NM_001280790:-132 AK301737:459 AK310333:462
+
|all_trans=HGNC:11476
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 22: Line 22:
 
|nearest_refseq=NM_033161
 
|nearest_refseq=NM_033161
 
|nearest_unigene=Hs.512465
 
|nearest_unigene=Hs.512465
|num_trans=35
+
|num_trans=6836
 
|species=human
 
|species=human
 
|start=133376023
 
|start=133376023

Latest revision as of 18:39, 19 July 2021

Basic information about the TSS


TSS ID:hg_102996.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133376023
End:133376034
Strand:-
TSS Score:1
Start of the center position in the TSS region:133376028
End of the center position in the TSS region:133376029



Gene and protein annotation


Transcript_name:BC111023
Distance:0
GeneID:6836
HGNC/MGI_ID:HGNC:11476
UniProt_ID:
Gene_name:surfeit 4
Gene_symbol:SURF4
Gene_synonyms:ERV29 FLJ22993 MGC102753
Gene_source:HGNC:11476



Transcript annotation


Transcript_name:BC111023
Distance:0
Num_trans:6836
All_trans:HGNC:11476



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_033161
Entrez ID:6836
Nearest Unigene:Hs.512465
Nearest Refseq:NM_033161
Nearest Ensembl:ENSG00000148248
Gene Name:surfeit 4
Gene Alias:ERV29
Gene Description:surfeit 4
Gene Type:protein-coding
CpG%:0.15
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):