Difference between revisions of "TSS:Hg 103001.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|XPMC2= | |XPMC2= | ||
|XPMC2H= | |XPMC2H= | ||
| − | |all_trans= | + | |all_trans=HGNC:12820 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-8 |
|end=133418035 | |end=133418035 | ||
| + | |end_of_center_position=133418018 | ||
|entrez_id=57109 | |entrez_id=57109 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=REX4 | + | |gene_alias=REX4{{!}}XPMC2{{!}}XPMC2H |
| − | |gene_description= | + | |gene_description=REX4 homolog, 3'-5' exonuclease |
|gene_id=57109 | |gene_id=57109 | ||
| − | |gene_name= | + | |gene_name=REX4 homolog, 3'-5' exonuclease |
|gene_source=HGNC:12820 | |gene_source=HGNC:12820 | ||
|gene_symbol=REXO4 | |gene_symbol=REXO4 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:12820 | |hgnc_mgi_id=HGNC:12820 | ||
|nearest_ensembl=ENSG00000148300 | |nearest_ensembl=ENSG00000148300 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020385 |
|nearest_refseq=NM_020385 | |nearest_refseq=NM_020385 | ||
|nearest_unigene=Hs.438409 | |nearest_unigene=Hs.438409 | ||
| − | |num_trans= | + | |num_trans=57109 |
|species=human | |species=human | ||
|start=133418000 | |start=133418000 | ||
| + | |start_of_center_position=133418017 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AL136894 AK315904 AK304547 AK314333 | + | |transcript_name=ENST00000371942.8 AL136894 AK315904 AK304547 AK314333 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103001.1 | |tss_id=hg_103001.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9GZR2 |
}} | }} | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133418017 |
|---|---|
| End of the center position in the TSS region: | 133418018 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000371942.8 AL136894 AK315904 AK304547 AK314333 |
|---|---|
| Distance: | 0 |
| Num_trans: | 57109 |
| All_trans: | HGNC:12820 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_020385 |
| Entrez ID: | 57109 |
| Nearest Unigene: | Hs.438409 |
| Nearest Refseq: | NM_020385 |
| Nearest Ensembl: | ENSG00000148300 |
| Gene Name: | REX4 homolog, 3'-5' exonuclease |
| Gene Alias: | REX4|XPMC2|XPMC2H |
| Gene Description: | REX4 homolog, 3'-5' exonuclease |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
