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Difference between revisions of "TSS:Hg 103002.1"

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Line 2: Line 2:
 
|XPMC2=
 
|XPMC2=
 
|XPMC2H=
 
|XPMC2H=
|all_trans=AF273304:0 AF295774:0 AL136894:10 LF205604:-17 MA441181:-17 AK304547:26 ENST00000371942.8:27 NR_103995:27 NM_001279350:27 NR_103996:27 NM_020385:27 AK315904:27 AK314333:27 BC009274:38 AK310164:38 ENST00000371935.6:-49 NM_001279349:-49 ENST00000454825.1:60 ENST00000478037.1:78 BC071691:82 ENST00000494045.5:83 AK025493:92 NM_001279351:-125 AK295982:-125 AM392617:189 DQ891911:193 KJ899305:193 DQ895096:193 CU679283:193 LF346463:250 MA582040:250
+
|all_trans=HGNC:12820
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_020385
 
|nearest_refseq=NM_020385
 
|nearest_unigene=Hs.438409
 
|nearest_unigene=Hs.438409
|num_trans=31
+
|num_trans=57109
 
|species=human
 
|species=human
 
|start=133418036
 
|start=133418036

Latest revision as of 18:39, 19 July 2021

Basic information about the TSS


TSS ID:hg_103002.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133418036
End:133418047
Strand:-
TSS Score:1
Start of the center position in the TSS region:133418041
End of the center position in the TSS region:133418042



Gene and protein annotation


Transcript_name:AF273304 AF295774
Distance:0
GeneID:57109
HGNC/MGI_ID:HGNC:12820
UniProt_ID:
Gene_name:REX4 homolog, 3'-5' exonuclease
Gene_symbol:REXO4
Gene_synonyms:hPMC2
Gene_source:HGNC:12820



Transcript annotation


Transcript_name:AF273304 AF295774
Distance:0
Num_trans:57109
All_trans:HGNC:12820



TATA-Box annotation


Distance to TSS:-32
Nearest PromoterID:NM_020385
Entrez ID:57109
Nearest Unigene:Hs.438409
Nearest Refseq:NM_020385
Nearest Ensembl:ENSG00000148300
Gene Name:REX4 homolog, 3'-5' exonuclease
Gene Alias:REX4|XPMC2|XPMC2H
Gene Description:REX4 homolog, 3'-5' exonuclease
Gene Type:protein-coding
CpG%:0.105
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):