Difference between revisions of "TSS:Hg 103002.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |XPMC2= | ||
| + | |XPMC2H= | ||
| + | |all_trans=HGNC:12820 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-32 | ||
| + | |end=133418047 | ||
| + | |end_of_center_position=133418042 | ||
|entrez_id=57109 | |entrez_id=57109 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=REX4 | + | |gene_alias=REX4{{!}}XPMC2{{!}}XPMC2H |
| − | |gene_description= | + | |gene_description=REX4 homolog, 3'-5' exonuclease |
| − | |gene_name=REXO4 | + | |gene_id=57109 |
| + | |gene_name=REX4 homolog, 3'-5' exonuclease | ||
| + | |gene_source=HGNC:12820 | ||
| + | |gene_symbol=REXO4 | ||
| + | |gene_synonyms=hPMC2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12820 | ||
|nearest_ensembl=ENSG00000148300 | |nearest_ensembl=ENSG00000148300 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020385 |
|nearest_refseq=NM_020385 | |nearest_refseq=NM_020385 | ||
|nearest_unigene=Hs.438409 | |nearest_unigene=Hs.438409 | ||
| + | |num_trans=57109 | ||
| + | |species=human | ||
| + | |start=133418036 | ||
| + | |start_of_center_position=133418041 | ||
| + | |strand=- | ||
| + | |transcript_name=AF273304 AF295774 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103002.1 | |tss_id=hg_103002.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133418041 |
|---|---|
| End of the center position in the TSS region: | 133418042 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF273304 AF295774 |
|---|---|
| Distance: | 0 |
| Num_trans: | 57109 |
| All_trans: | HGNC:12820 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_020385 |
| Entrez ID: | 57109 |
| Nearest Unigene: | Hs.438409 |
| Nearest Refseq: | NM_020385 |
| Nearest Ensembl: | ENSG00000148300 |
| Gene Name: | REX4 homolog, 3'-5' exonuclease |
| Gene Alias: | REX4|XPMC2|XPMC2H |
| Gene Description: | REX4 homolog, 3'-5' exonuclease |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
