Difference between revisions of "TSS:Hg 103035.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|SARD= | |SARD= | ||
|SDH= | |SDH= | ||
| − | |all_trans= | + | |all_trans=HGNC:10536 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=133738354 | |end=133738354 | ||
| + | |end_of_center_position=133738345 | ||
|entrez_id=1757 | |entrez_id=1757 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=BPR-2 | + | |gene_alias=BPR-2{{!}}DMGDHL1{{!}}SAR{{!}}SARD{{!}}SDH |
|gene_description=sarcosine dehydrogenase | |gene_description=sarcosine dehydrogenase | ||
|gene_id=1757 | |gene_id=1757 | ||
| Line 25: | Line 26: | ||
|nearest_refseq=NM_007101 | |nearest_refseq=NM_007101 | ||
|nearest_unigene=Hs.198003 | |nearest_unigene=Hs.198003 | ||
| − | |num_trans= | + | |num_trans=1757 |
|species=human | |species=human | ||
|start=133738334 | |start=133738334 | ||
| + | |start_of_center_position=133738344 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK291211 | + | |transcript_name=ENST00000439388.6 AK291211 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_103035.1 | |tss_id=hg_103035.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A8K596 | + | |uniprot_id=A8K596 Q9UL12 |
}} | }} | ||
Latest revision as of 18:40, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133738344 |
|---|---|
| End of the center position in the TSS region: | 133738345 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000439388.6 AK291211 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1757 |
| All_trans: | HGNC:10536 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001134707 |
| Entrez ID: | 1757 |
| Nearest Unigene: | Hs.198003 |
| Nearest Refseq: | NM_007101 |
| Nearest Ensembl: | ENSG00000123453 |
| Gene Name: | sarcosine dehydrogenase |
| Gene Alias: | BPR-2|DMGDHL1|SAR|SARD|SDH |
| Gene Description: | sarcosine dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
