Difference between revisions of "TSS:Hg 103075.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=16 | ||
|distance_to_tss=-18 | |distance_to_tss=-18 | ||
| + | |end=134872638 | ||
| + | |end_of_center_position=134872636 | ||
|entrez_id=101448202 | |entrez_id=101448202 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101448202 | |gene_description=uncharacterized LOC101448202 | ||
| − | |gene_name=LOC101448202 | + | |gene_id=101448202 |
| + | |gene_name=uncharacterized LOC101448202 | ||
| + | |gene_source=EntrezGene:101448202 | ||
| + | |gene_symbol=LOC101448202 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_103451 | |nearest_promoter_id=NR_103451 | ||
|nearest_refseq=NR_103451 | |nearest_refseq=NR_103451 | ||
|nearest_unigene=Hs.679677 | |nearest_unigene=Hs.679677 | ||
| − | |tata_box= | + | |num_trans=101448202 |
| + | |species=human | ||
| + | |start=134872633 | ||
| + | |start_of_center_position=134872635 | ||
| + | |strand=- | ||
| + | |tata_box=-34(GGTTTTATAAAG,-,0.00),-32(TTTTATAAAGGG,+,0.00) | ||
| + | |transcript_name=BC058547 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103075.1 | |tss_id=hg_103075.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:40, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 134872635 |
|---|---|
| End of the center position in the TSS region: | 134872636 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC058547 |
|---|---|
| Distance: | 16 |
| Num_trans: | 101448202 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NR_103451 |
| Entrez ID: | 101448202 |
| Nearest Unigene: | Hs.679677 |
| Nearest Refseq: | NR_103451 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC101448202 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101448202 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GGTTTTATAAAG,-,0.00),-32(TTTTATAAAGGG,+,0.00) |
