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Difference between revisions of "TSS:Hg 103096.1"

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Line 2: Line 2:
 
|MRP-S2=
 
|MRP-S2=
 
|S2mt=
 
|S2mt=
|all_trans=ENST00000371791.5:8 BC021261:8
+
|all_trans=HGNC:28435
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 24: Line 24:
 
|nearest_refseq=NM_016034
 
|nearest_refseq=NM_016034
 
|nearest_unigene=Hs.382044
 
|nearest_unigene=Hs.382044
|num_trans=2
+
|num_trans=138162
 
|species=human
 
|species=human
 
|start=135501741
 
|start=135501741

Latest revision as of 18:41, 19 July 2021

Basic information about the TSS


TSS ID:hg_103096.1
Species:human
Chr:chr9
TSS Classification:yes
Start:135501741
End:135501760
Strand:-
TSS Score:1
Start of the center position in the TSS region:135501750
End of the center position in the TSS region:135501751



Gene and protein annotation


Transcript_name:ENST00000371791.5 BC021261
Distance:8
GeneID:138162
HGNC/MGI_ID:HGNC:28435
UniProt_ID:Q5BN46
Gene_name:chromosome 9 open reading frame 116
Gene_symbol:C9orf116
Gene_synonyms:MGC29761 PIERCE1 RbEST47
Gene_source:HGNC:28435



Transcript annotation


Transcript_name:ENST00000371791.5 BC021261
Distance:8
Num_trans:138162
All_trans:HGNC:28435



TATA-Box annotation


Distance to TSS:1069
Nearest PromoterID:NR_051970
Entrez ID:51116
Nearest Unigene:Hs.382044
Nearest Refseq:NM_016034
Nearest Ensembl:ENSG00000122140
Gene Name:chromosome 9 open reading frame 116
Gene Alias:CGI-91|COXPD36|MRP-S2|S2mt
Gene Description:mitochondrial ribosomal protein S2
Gene Type:protein-coding
CpG%:0.045
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):