Difference between revisions of "TSS:Hg 103141.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |LIM3= | ||
| + | |M2-LHX3= | ||
| + | |all_trans=HGNC:30249 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss=- | + | |distance=110 |
| + | |distance_to_tss=-14119 | ||
| + | |end=136219249 | ||
| + | |end_of_center_position=136219247 | ||
|entrez_id=8022 | |entrez_id=8022 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=CPHD3 | + | |gene_alias=CPHD3{{!}}LIM3{{!}}M2-LHX3 |
|gene_description=LIM homeobox 3 | |gene_description=LIM homeobox 3 | ||
| − | |gene_name= | + | |gene_id=169714 |
| + | |gene_name=quiescin sulfhydryl oxidase 2 | ||
| + | |gene_source=HGNC:30249 | ||
| + | |gene_symbol=QSOX2 | ||
| + | |gene_synonyms=DKFZp762A2013 SOXN | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30249 | ||
|nearest_ensembl=ENSG00000107187 | |nearest_ensembl=ENSG00000107187 | ||
|nearest_promoter_id=NM_178138 | |nearest_promoter_id=NM_178138 | ||
|nearest_refseq=NM_014564 | |nearest_refseq=NM_014564 | ||
|nearest_unigene=Hs.148427 | |nearest_unigene=Hs.148427 | ||
| + | |num_trans=169714 | ||
| + | |species=human | ||
| + | |start=136219244 | ||
| + | |start_of_center_position=136219246 | ||
| + | |strand=- | ||
| + | |transcript_name=AK128750 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103141.1 | |tss_id=hg_103141.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KY64 | ||
}} | }} | ||
Latest revision as of 18:42, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136219246 |
|---|---|
| End of the center position in the TSS region: | 136219247 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK128750 |
|---|---|
| Distance: | 110 |
| Num_trans: | 169714 |
| All_trans: | HGNC:30249 |
TATA-Box annotation
| Distance to TSS: | -14119 |
|---|---|
| Nearest PromoterID: | NM_178138 |
| Entrez ID: | 8022 |
| Nearest Unigene: | Hs.148427 |
| Nearest Refseq: | NM_014564 |
| Nearest Ensembl: | ENSG00000107187 |
| Gene Name: | quiescin sulfhydryl oxidase 2 |
| Gene Alias: | CPHD3|LIM3|M2-LHX3 |
| Gene Description: | LIM homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
