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Difference between revisions of "TSS:Hg 10320.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AJ237672:-107 LF357342:108 MA592919:108 ENST00000641407.1:-245 AB209113:-245 ENST00000641721.1:-310 LF213889:-367 MA449466:-367 ENST00000376583.7:-376 ENST00000423400.7:-388 ENST00000641759.1:-388 ENST00000641909.1:-388
+
|all_trans=HGNC:7436
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NM_005957
 
|nearest_refseq=NM_005957
 
|nearest_unigene=Hs.214142
 
|nearest_unigene=Hs.214142
|num_trans=12
+
|num_trans=4524
 
|species=human
 
|species=human
 
|start=11803114
 
|start=11803114

Latest revision as of 18:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_10320.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11803114
End:11803138
Strand:-
TSS Score:1
Start of the center position in the TSS region:11803126
End of the center position in the TSS region:11803127



Gene and protein annotation


Transcript_name:AJ237672
Distance:-107
GeneID:4524
HGNC/MGI_ID:HGNC:7436
UniProt_ID:
Gene_name:methylenetetrahydrofolate reductase
Gene_symbol:MTHFR
Gene_synonyms:
Gene_source:HGNC:7436



Transcript annotation


Transcript_name:AJ237672
Distance:-107
Num_trans:4524
All_trans:HGNC:7436



TATA-Box annotation


Distance to TSS:551
Nearest PromoterID:NM_001330358
Entrez ID:4524
Nearest Unigene:Hs.214142
Nearest Refseq:NM_005957
Nearest Ensembl:ENSG00000177000
Gene Name:methylenetetrahydrofolate reductase
Gene Alias:-
Gene Description:methylenetetrahydrofolate reductase
Gene Type:protein-coding
CpG%:0.025
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):