Difference between revisions of "TSS:Hg 103209.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans= | + | |all_trans=HGNC:27038 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance=- | + | |distance=-143 |
|distance_to_tss=192 | |distance_to_tss=192 | ||
|end=136758091 | |end=136758091 | ||
| + | |end_of_center_position=136758087 | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_178469 | |nearest_refseq=NM_178469 | ||
|nearest_unigene=Hs.323991 | |nearest_unigene=Hs.323991 | ||
| − | |num_trans= | + | |num_trans=138307 |
|species=human | |species=human | ||
|start=136758082 | |start=136758082 | ||
| + | |start_of_center_position=136758086 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC130465 BC132714 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103209.1 | |tss_id=hg_103209.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136758086 |
|---|---|
| End of the center position in the TSS region: | 136758087 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC130465 BC132714 |
|---|---|
| Distance: | -143 |
| Num_trans: | 138307 |
| All_trans: | HGNC:27038 |
TATA-Box annotation
| Distance to TSS: | 192 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
